RNA–Protein interactions for RNA: ENST00000619810.4

SHISA5-220, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 2,385 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-220ENST00000619810 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
SHISA5-220ENST00000619810 CCDC180Q9P1Z9 1646 aa33.39■■■□□ 2.94
SHISA5-220ENST00000619810 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
SHISA5-220ENST00000619810 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
SHISA5-220ENST00000619810 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
SHISA5-220ENST00000619810 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
SHISA5-220ENST00000619810 DCAF8L2P0C7V8 631 aa32.12■■■□□ 2.73
SHISA5-220ENST00000619810 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
SHISA5-220ENST00000619810 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
SHISA5-220ENST00000619810 ABCC9O60706 1549 aa31.19■■■□□ 2.58
SHISA5-220ENST00000619810 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
SHISA5-220ENST00000619810 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
SHISA5-220ENST00000619810 NACADO15069 1562 aa30.87■■■□□ 2.53
SHISA5-220ENST00000619810 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
SHISA5-220ENST00000619810 LOC105371045A0A1W2PR82 267 aa30.47■■■□□ 2.47
SHISA5-220ENST00000619810 HRCP23327 699 aa30.44■■■□□ 2.46
SHISA5-220ENST00000619810 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
SHISA5-220ENST00000619810 PCGF6Q9BYE7 350 aa30.37■■■□□ 2.45
SHISA5-220ENST00000619810 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
SHISA5-220ENST00000619810 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
SHISA5-220ENST00000619810 WIZO95785 1651 aa30.13■■■□□ 2.41
SHISA5-220ENST00000619810 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
SHISA5-220ENST00000619810 TRIM26Q12899 539 aaPredicted RBP29.98■■■□□ 2.39
SHISA5-220ENST00000619810 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
SHISA5-220ENST00000619810 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
SHISA5-220ENST00000619810 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
SHISA5-220ENST00000619810 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
SHISA5-220ENST00000619810 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
SHISA5-220ENST00000619810 PPARGC1BQ86YN6 1023 aaKnown RBP29.62■■■□□ 2.33
SHISA5-220ENST00000619810 CCDC88BA6NC98 1476 aa29.57■■■□□ 2.32
SHISA5-220ENST00000619810 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
SHISA5-220ENST00000619810 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
SHISA5-220ENST00000619810 EHMT2Q96KQ7 1210 aa29.41■■■□□ 2.3
SHISA5-220ENST00000619810 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
SHISA5-220ENST00000619810 ZEB1P37275 1124 aaPredicted RBP29.38■■■□□ 2.29
SHISA5-220ENST00000619810 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
SHISA5-220ENST00000619810 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
SHISA5-220ENST00000619810 EEA1Q15075 1411 aa29.17■■■□□ 2.26
SHISA5-220ENST00000619810 SOGA1O94964 1423 aa29.11■■■□□ 2.25
SHISA5-220ENST00000619810 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
SHISA5-220ENST00000619810 TNIKQ9UKE5 1360 aa29.04■■■□□ 2.24
SHISA5-220ENST00000619810 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
SHISA5-220ENST00000619810 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
SHISA5-220ENST00000619810 CEP162Q5TB80 1403 aa28.99■■■□□ 2.23
SHISA5-220ENST00000619810 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
SHISA5-220ENST00000619810 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
SHISA5-220ENST00000619810 GOLGA3Q08378 1498 aa28.86■■■□□ 2.21
SHISA5-220ENST00000619810 SYNJ1O43426 1573 aa28.83■■■□□ 2.21
SHISA5-220ENST00000619810 UBTFP17480 764 aaKnown RBP28.79■■■□□ 2.2
SHISA5-220ENST00000619810 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
SHISA5-220ENST00000619810 KIF21BO75037 1637 aa28.72■■■□□ 2.19
SHISA5-220ENST00000619810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.64■■■□□ 2.17
SHISA5-220ENST00000619810 CCER1Q8TC90 406 aaPredicted RBP28.61■■■□□ 2.17
SHISA5-220ENST00000619810 TOP2BQ02880 1626 aa28.57■■■□□ 2.16
SHISA5-220ENST00000619810 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
SHISA5-220ENST00000619810 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
SHISA5-220ENST00000619810 CLIP1P30622 1438 aa28.48■■■□□ 2.15
SHISA5-220ENST00000619810 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
SHISA5-220ENST00000619810 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
SHISA5-220ENST00000619810 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
SHISA5-220ENST00000619810 VPS8Q8N3P4 1428 aa28.39■■■□□ 2.14
SHISA5-220ENST00000619810 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
SHISA5-220ENST00000619810 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
SHISA5-220ENST00000619810 CFTRP13569 1480 aa28.27■■■□□ 2.12
SHISA5-220ENST00000619810 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
SHISA5-220ENST00000619810 CUX1P39880 1505 aa28.25■■■□□ 2.11
SHISA5-220ENST00000619810 APLP2Q06481 763 aa28.19■■■□□ 2.1
SHISA5-220ENST00000619810 KIF27Q86VH2 1401 aa28.14■■■□□ 2.1
SHISA5-220ENST00000619810 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
SHISA5-220ENST00000619810 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
SHISA5-220ENST00000619810 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
SHISA5-220ENST00000619810 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
SHISA5-220ENST00000619810 DIEXFQ68CQ4 756 aaKnown RBP28.03■■■□□ 2.08
SHISA5-220ENST00000619810 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
SHISA5-220ENST00000619810 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
SHISA5-220ENST00000619810 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
SHISA5-220ENST00000619810 SCAF1Q9H7N4 1312 aaKnown RBP27.89■■■□□ 2.05
SHISA5-220ENST00000619810 CUX2O14529 1486 aa27.82■■■□□ 2.04
SHISA5-220ENST00000619810 ARHGAP35Q9NRY4 1499 aa27.82■■■□□ 2.04
SHISA5-220ENST00000619810 IGF1RP08069 1367 aa27.82■■■□□ 2.04
SHISA5-220ENST00000619810 KANK4Q5T7N3 995 aaPredicted RBP27.79■■■□□ 2.04
SHISA5-220ENST00000619810 ACIN1Q9UKV3 1341 aaKnown RBP27.76■■■□□ 2.03
SHISA5-220ENST00000619810 RRBP1Q9P2E9 1410 aaKnown RBP27.75■■■□□ 2.03
SHISA5-220ENST00000619810 CLSPNQ9HAW4 1339 aa27.75■■■□□ 2.03
SHISA5-220ENST00000619810 FGD5Q6ZNL6 1462 aa27.75■■■□□ 2.03
SHISA5-220ENST00000619810 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
SHISA5-220ENST00000619810 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
SHISA5-220ENST00000619810 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
SHISA5-220ENST00000619810 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
SHISA5-220ENST00000619810 DHX57Q6P158 1386 aaKnown RBP27.63■■■□□ 2.01
SHISA5-220ENST00000619810 MAP3K1Q13233 1512 aa27.63■■■□□ 2.01
SHISA5-220ENST00000619810 CCNB3Q8WWL7 1395 aa27.59■■■□□ 2.01
SHISA5-220ENST00000619810 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
SHISA5-220ENST00000619810 TIAM1Q13009 1591 aa27.53■■■□□ 2
SHISA5-220ENST00000619810 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
SHISA5-220ENST00000619810 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
SHISA5-220ENST00000619810 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
SHISA5-220ENST00000619810 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
SHISA5-220ENST00000619810 LRRC9Q6ZRR7 1453 aa27.43■■□□□ 1.98
SHISA5-220ENST00000619810 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms