RNA–Protein interactions for RNA: ENST00000314852.2

IMP3-201, Transcript of IMP3, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IMP3, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP3-201ENST00000314852 NISCHQ9Y2I1 1504 aa38.39■■■■□ 3.74
IMP3-201ENST00000314852 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
IMP3-201ENST00000314852 ZCCHC6Q5VYS8 1495 aaKnown RBP32.51■■■□□ 2.79
IMP3-201ENST00000314852 SHROOM4Q9ULL8 1493 aa32.28■■■□□ 2.76
IMP3-201ENST00000314852 SUPT5HO00267 1087 aaKnown RBP31.81■■■□□ 2.68
IMP3-201ENST00000314852 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
IMP3-201ENST00000314852 ABCC9O60706 1549 aa31.75■■■□□ 2.67
IMP3-201ENST00000314852 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.62
IMP3-201ENST00000314852 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
IMP3-201ENST00000314852 MYO15BQ96JP2 1530 aa31.13■■■□□ 2.57
IMP3-201ENST00000314852 NACADO15069 1562 aa31.03■■■□□ 2.56
IMP3-201ENST00000314852 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
IMP3-201ENST00000314852 SCRIBQ14160 1630 aa30.49■■■□□ 2.47
IMP3-201ENST00000314852 HRCP23327 699 aa30.46■■■□□ 2.47
IMP3-201ENST00000314852 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
IMP3-201ENST00000314852 UNC13AQ9UPW8 1703 aa30.24■■■□□ 2.43
IMP3-201ENST00000314852 PCGF6Q9BYE7 350 aa30.15■■■□□ 2.42
IMP3-201ENST00000314852 LOC105371045A0A1W2PR82 267 aa30.05■■■□□ 2.4
IMP3-201ENST00000314852 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
IMP3-201ENST00000314852 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
IMP3-201ENST00000314852 TRIM26Q12899 539 aaPredicted RBP29.86■■■□□ 2.37
IMP3-201ENST00000314852 TRIM41Q8WV44 630 aa29.83■■■□□ 2.37
IMP3-201ENST00000314852 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
IMP3-201ENST00000314852 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
IMP3-201ENST00000314852 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
IMP3-201ENST00000314852 WIZO95785 1651 aa29.5■■■□□ 2.31
IMP3-201ENST00000314852 ZEB1P37275 1124 aaPredicted RBP29.46■■■□□ 2.31
IMP3-201ENST00000314852 PPARGC1BQ86YN6 1023 aaKnown RBP29.41■■■□□ 2.3
IMP3-201ENST00000314852 EIF4G1Q04637 1599 aaKnown RBP29.31■■■□□ 2.28
IMP3-201ENST00000314852 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
IMP3-201ENST00000314852 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
IMP3-201ENST00000314852 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
IMP3-201ENST00000314852 CCDC88BA6NC98 1476 aa29.02■■■□□ 2.24
IMP3-201ENST00000314852 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
IMP3-201ENST00000314852 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
IMP3-201ENST00000314852 EEA1Q15075 1411 aa28.89■■■□□ 2.22
IMP3-201ENST00000314852 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
IMP3-201ENST00000314852 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.21
IMP3-201ENST00000314852 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
IMP3-201ENST00000314852 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
IMP3-201ENST00000314852 TNIKQ9UKE5 1360 aa28.74■■■□□ 2.19
IMP3-201ENST00000314852 CC2D2AQ9P2K1 1620 aa28.73■■■□□ 2.19
IMP3-201ENST00000314852 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
IMP3-201ENST00000314852 BAZ1BQ9UIG0 1483 aaKnown RBP28.63■■■□□ 2.17
IMP3-201ENST00000314852 CEP162Q5TB80 1403 aa28.62■■■□□ 2.17
IMP3-201ENST00000314852 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
IMP3-201ENST00000314852 SOGA1O94964 1423 aa28.6■■■□□ 2.17
IMP3-201ENST00000314852 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
IMP3-201ENST00000314852 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
IMP3-201ENST00000314852 CCER1Q8TC90 406 aaPredicted RBP28.42■■■□□ 2.14
IMP3-201ENST00000314852 RUSC2Q8N2Y8 1516 aa28.39■■■□□ 2.14
IMP3-201ENST00000314852 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
IMP3-201ENST00000314852 CEP164Q9UPV0 1460 aa28.36■■■□□ 2.13
IMP3-201ENST00000314852 KIF21BO75037 1637 aa28.36■■■□□ 2.13
IMP3-201ENST00000314852 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
IMP3-201ENST00000314852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.34■■■□□ 2.13
IMP3-201ENST00000314852 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
IMP3-201ENST00000314852 CLIP1P30622 1438 aa28.1■■■□□ 2.09
IMP3-201ENST00000314852 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
IMP3-201ENST00000314852 VPS8Q8N3P4 1428 aa28.06■■■□□ 2.08
IMP3-201ENST00000314852 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
IMP3-201ENST00000314852 PELP1Q8IZL8 1130 aaKnown RBP27.96■■■□□ 2.07
IMP3-201ENST00000314852 DIEXFQ68CQ4 756 aaKnown RBP27.96■■■□□ 2.07
IMP3-201ENST00000314852 RAPGEF2Q9Y4G8 1499 aa27.94■■■□□ 2.06
IMP3-201ENST00000314852 SCAF1Q9H7N4 1312 aaKnown RBP27.94■■■□□ 2.06
IMP3-201ENST00000314852 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
IMP3-201ENST00000314852 TTBK1Q5TCY1 1321 aaPredicted RBP27.93■■■□□ 2.06
IMP3-201ENST00000314852 CFTRP13569 1480 aa27.93■■■□□ 2.06
IMP3-201ENST00000314852 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
IMP3-201ENST00000314852 APLP2Q06481 763 aa27.89■■■□□ 2.06
IMP3-201ENST00000314852 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
IMP3-201ENST00000314852 ACIN1Q9UKV3 1341 aaKnown RBP27.83■■■□□ 2.05
IMP3-201ENST00000314852 ZNF316A6NFI3 1004 aaPredicted RBP27.83■■■□□ 2.05
IMP3-201ENST00000314852 CENPBP07199 599 aaPredicted RBP27.79■■■□□ 2.04
IMP3-201ENST00000314852 NESP48681 1621 aa27.77■■■□□ 2.04
IMP3-201ENST00000314852 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
IMP3-201ENST00000314852 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
IMP3-201ENST00000314852 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
IMP3-201ENST00000314852 CLSPNQ9HAW4 1339 aa27.68■■■□□ 2.02
IMP3-201ENST00000314852 CUX1P39880 1505 aa27.67■■■□□ 2.02
IMP3-201ENST00000314852 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
IMP3-201ENST00000314852 NEUROD1Q13562 356 aa27.62■■■□□ 2.01
IMP3-201ENST00000314852 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
IMP3-201ENST00000314852 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
IMP3-201ENST00000314852 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
IMP3-201ENST00000314852 RRBP1Q9P2E9 1410 aaKnown RBP27.47■■□□□ 1.99
IMP3-201ENST00000314852 KIF21AQ7Z4S6 1674 aa27.42■■□□□ 1.98
IMP3-201ENST00000314852 RANGAP1P46060 587 aaPredicted RBP27.4■■□□□ 1.98
IMP3-201ENST00000314852 CUX2O14529 1486 aa27.39■■□□□ 1.98
IMP3-201ENST00000314852 ARHGAP35Q9NRY4 1499 aa27.37■■□□□ 1.97
IMP3-201ENST00000314852 GTF3C3Q9Y5Q9 886 aa27.37■■□□□ 1.97
IMP3-201ENST00000314852 MAP3K1Q13233 1512 aa27.37■■□□□ 1.97
IMP3-201ENST00000314852 DHX57Q6P158 1386 aaKnown RBP27.36■■□□□ 1.97
IMP3-201ENST00000314852 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
IMP3-201ENST00000314852 IGF1RP08069 1367 aa27.32■■□□□ 1.96
IMP3-201ENST00000314852 CCNB3Q8WWL7 1395 aa27.27■■□□□ 1.96
IMP3-201ENST00000314852 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
IMP3-201ENST00000314852 MIER1Q8N108 512 aa27.26■■□□□ 1.95
IMP3-201ENST00000314852 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
IMP3-201ENST00000314852 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms