Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL1A2P08123 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL1A2P08123 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL1A2P08123 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL1A2P08123 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.74■■□□□ 1.07
COL1A2P08123 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.74■■□□□ 1.07
COL1A2P08123 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.73■■□□□ 1.07
COL1A2P08123 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 FSCN1P1-201ENST00000568912 1481 ntBASIC21.73■■□□□ 1.07
COL1A2P08123 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 AC004980.1-204ENST00000429707 299 ntBASIC21.73■■□□□ 1.07
COL1A2P08123 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.73■■□□□ 1.07
COL1A2P08123 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COL1A2P08123 AP000525.1-201ENST00000608286 694 ntBASIC21.73■■□□□ 1.07
COL1A2P08123 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.73■■□□□ 1.07
COL1A2P08123 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A2P08123 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.72■■□□□ 1.07
COL1A2P08123 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.72■■□□□ 1.07
COL1A2P08123 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL1A2P08123 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL1A2P08123 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
COL1A2P08123 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.72■■□□□ 1.07
COL1A2P08123 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.72■■□□□ 1.07
COL1A2P08123 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.72■■□□□ 1.07
COL1A2P08123 AC131212.4-201ENST00000623606 975 ntBASIC21.72■■□□□ 1.07
COL1A2P08123 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 GABARAPL3-202ENST00000624044 1851 ntBASIC21.72■■□□□ 1.07
COL1A2P08123 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL1A2P08123 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL1A2P08123 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A2P08123 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
COL1A2P08123 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
COL1A2P08123 MESTP1-201ENST00000404287 994 ntBASIC21.71■■□□□ 1.07
COL1A2P08123 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.71■■□□□ 1.07
COL1A2P08123 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A2P08123 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.71■■□□□ 1.07
COL1A2P08123 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
COL1A2P08123 DGCR10-201ENST00000609839 495 ntBASIC21.71■■□□□ 1.07
COL1A2P08123 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A2P08123 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.71■■□□□ 1.07
COL1A2P08123 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A2P08123 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A2P08123 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL1A2P08123 KRT8P8-201ENST00000434750 1448 ntBASIC21.7■■□□□ 1.07
COL1A2P08123 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.7■■□□□ 1.06
COL1A2P08123 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 AL162377.1-201ENST00000618844 1793 ntBASIC21.7■■□□□ 1.06
COL1A2P08123 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.7■■□□□ 1.06
COL1A2P08123 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL1A2P08123 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 FAM210CP-201ENST00000445714 574 ntBASIC21.7■■□□□ 1.06
COL1A2P08123 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.7■■□□□ 1.06
COL1A2P08123 FITM1-202ENST00000559294 800 ntBASIC21.7■■□□□ 1.06
COL1A2P08123 MIR6786-201ENST00000616843 113 ntBASIC21.7■■□□□ 1.06
COL1A2P08123 HLA-A-209ENST00000638375 975 ntBASIC21.7■■□□□ 1.06
COL1A2P08123 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A2P08123 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COL1A2P08123 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.69■■□□□ 1.06
COL1A2P08123 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms