RNA–Protein interactions for RNA: ENST00000395839.5

UBB-203, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBB, Length 1,012 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-203ENST00000395839 NISCHQ9Y2I1 1504 aa47.83■■■■■ 5.25
UBB-203ENST00000395839 ABCC9O60706 1549 aa44.2■■■■■ 4.67
UBB-203ENST00000395839 CCDC180Q9P1Z9 1646 aa43.1■■■■■ 4.49
UBB-203ENST00000395839 DNAJC5BQ9UF47 199 aa42.38■■■■■ 4.37
UBB-203ENST00000395839 RB1CC1Q8TDY2 1594 aa41.54■■■■■ 4.24
UBB-203ENST00000395839 PABPN1Q86U42 306 aaKnown RBP eCLIP41.15■■■■■ 4.18
UBB-203ENST00000395839 NACADO15069 1562 aa41.06■■■■■ 4.16
UBB-203ENST00000395839 DCAF8L2P0C7V8 631 aa40.97■■■■■ 4.15
UBB-203ENST00000395839 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
UBB-203ENST00000395839 BICRAQ9NZM4 1560 aa40.42■■■■■ 4.06
UBB-203ENST00000395839 MYO15BQ96JP2 1530 aa40.19■■■■■ 4.02
UBB-203ENST00000395839 CECR2Q9BXF3 1484 aa39.88■■■■□ 3.98
UBB-203ENST00000395839 CC2D2AQ9P2K1 1620 aa39.79■■■■□ 3.96
UBB-203ENST00000395839 SHROOM4Q9ULL8 1493 aa39.68■■■■□ 3.94
UBB-203ENST00000395839 EIF4G1Q04637 1599 aaKnown RBP39.49■■■■□ 3.91
UBB-203ENST00000395839 DNAJC5Q9H3Z4 198 aa39.46■■■■□ 3.91
UBB-203ENST00000395839 ZCCHC6Q5VYS8 1495 aaKnown RBP39.43■■■■□ 3.9
UBB-203ENST00000395839 SCRIBQ14160 1630 aa39.38■■■■□ 3.89
UBB-203ENST00000395839 DCAF1Q9Y4B6 1507 aa39.37■■■■□ 3.89
UBB-203ENST00000395839 CUX2O14529 1486 aa38.34■■■■□ 3.73
UBB-203ENST00000395839 ERCC6Q03468 1493 aa38.18■■■■□ 3.7
UBB-203ENST00000395839 NCAPD3P42695 1498 aa38.01■■■■□ 3.67
UBB-203ENST00000395839 ATAD2BQ9ULI0 1458 aa37.78■■■■□ 3.64
UBB-203ENST00000395839 NESP48681 1621 aa37.73■■■■□ 3.63
UBB-203ENST00000395839 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
UBB-203ENST00000395839 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
UBB-203ENST00000395839 SMARCA4P51532 1647 aa37.43■■■■□ 3.58
UBB-203ENST00000395839 TRIM41Q8WV44 630 aa37.42■■■■□ 3.58
UBB-203ENST00000395839 THOC2Q8NI27 1593 aaKnown RBP37.37■■■■□ 3.57
UBB-203ENST00000395839 BAZ1BQ9UIG0 1483 aaKnown RBP37.34■■■■□ 3.57
UBB-203ENST00000395839 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
UBB-203ENST00000395839 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
UBB-203ENST00000395839 PDS5BQ9NTI5 1447 aa37.1■■■■□ 3.53
UBB-203ENST00000395839 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
UBB-203ENST00000395839 KIF21AQ7Z4S6 1674 aa37.03■■■■□ 3.52
UBB-203ENST00000395839 MROH2BQ7Z745 1585 aa36.89■■■■□ 3.5
UBB-203ENST00000395839 CADPSQ9ULU8 1353 aa36.85■■■■□ 3.49
UBB-203ENST00000395839 MRC2Q9UBG0 1479 aa36.81■■■■□ 3.48
UBB-203ENST00000395839 WDR62O43379 1518 aa36.7■■■■□ 3.47
UBB-203ENST00000395839 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
UBB-203ENST00000395839 CEP164Q9UPV0 1460 aa36.48■■■■□ 3.43
UBB-203ENST00000395839 FANCD2Q9BXW9 1451 aa36.4■■■■□ 3.42
UBB-203ENST00000395839 WIZO95785 1651 aa36.34■■■■□ 3.41
UBB-203ENST00000395839 CFTRP13569 1480 aa36.21■■■■□ 3.39
UBB-203ENST00000395839 URB2Q14146 1524 aaKnown RBP36.17■■■■□ 3.38
UBB-203ENST00000395839 RIMBP3CA6NJZ7 1639 aa36.06■■■■□ 3.36
UBB-203ENST00000395839 RIMBP3BA6NNM3 1639 aa36.06■■■■□ 3.36
UBB-203ENST00000395839 RIMBP3Q9UFD9 1639 aa36.06■■■■□ 3.36
UBB-203ENST00000395839 ARHGEF11O15085 1522 aa35.9■■■■□ 3.34
UBB-203ENST00000395839 ZNF608Q9ULD9 1512 aaPredicted RBP35.9■■■■□ 3.34
UBB-203ENST00000395839 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
UBB-203ENST00000395839 CYB5RLQ6IPT4 315 aa35.85■■■■□ 3.33
UBB-203ENST00000395839 TOP2AP11388 1531 aaKnown RBP35.8■■■■□ 3.32
UBB-203ENST00000395839 IFT140Q96RY7 1462 aa35.8■■■■□ 3.32
UBB-203ENST00000395839 TRHP20396 242 aaPredicted RBP35.72■■■■□ 3.31
UBB-203ENST00000395839 TOPBP1Q92547 1522 aa35.6■■■■□ 3.29
UBB-203ENST00000395839 ARAP1Q96P48 1450 aa35.53■■■■□ 3.28
UBB-203ENST00000395839 EIF4G3O43432 1585 aaKnown RBP35.51■■■■□ 3.28
UBB-203ENST00000395839 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.28
UBB-203ENST00000395839 AQRO60306 1485 aaKnown RBP eCLIP35.49■■■■□ 3.27
UBB-203ENST00000395839 FBLN2P98095 1184 aa35.49■■■■□ 3.27
UBB-203ENST00000395839 PRDM2Q13029 1718 aa35.49■■■■□ 3.27
UBB-203ENST00000395839 ABCC8Q09428 1581 aa35.4■■■■□ 3.26
UBB-203ENST00000395839 CHD1O14646 1710 aa35.35■■■■□ 3.25
UBB-203ENST00000395839 DNMBPQ6XZF7 1577 aa35.33■■■■□ 3.25
UBB-203ENST00000395839 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
UBB-203ENST00000395839 AEBP2Q6ZN18 517 aaPredicted RBP35.27■■■■□ 3.24
UBB-203ENST00000395839 POLA1P09884 1462 aaPredicted RBP35.19■■■■□ 3.22
UBB-203ENST00000395839 TDRD9Q8NDG6 1382 aaKnown RBP35.17■■■■□ 3.22
UBB-203ENST00000395839 RAD54L2Q9Y4B4 1467 aa35.15■■■■□ 3.22
UBB-203ENST00000395839 SOGA1O94964 1423 aa35.07■■■■□ 3.21
UBB-203ENST00000395839 CHMP7Q8WUX9 453 aaPredicted RBP35.05■■■■□ 3.2
UBB-203ENST00000395839 SNAPC4Q5SXM2 1469 aa35.03■■■■□ 3.2
UBB-203ENST00000395839 CLASP1Q7Z460 1538 aa35.02■■■■□ 3.2
UBB-203ENST00000395839 SYNJ1O43426 1573 aa34.88■■■■□ 3.17
UBB-203ENST00000395839 FGD5Q6ZNL6 1462 aa34.85■■■■□ 3.17
UBB-203ENST00000395839 MAGI1Q96QZ7 1491 aaPredicted RBP34.85■■■■□ 3.17
UBB-203ENST00000395839 GRIN2BQ13224 1484 aa34.8■■■■□ 3.16
UBB-203ENST00000395839 SYNJ2O15056 1496 aa34.78■■■■□ 3.16
UBB-203ENST00000395839 GAPVD1Q14C86 1478 aa34.78■■■■□ 3.16
UBB-203ENST00000395839 WDR97A6NE52 1622 aa34.76■■■■□ 3.15
UBB-203ENST00000395839 CUX1P39880 1505 aa34.69■■■■□ 3.14
UBB-203ENST00000395839 SUPT5HO00267 1087 aaKnown RBP34.62■■■■□ 3.13
UBB-203ENST00000395839 ERCC6L2Q5T890 1561 aa34.49■■■■□ 3.11
UBB-203ENST00000395839 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
UBB-203ENST00000395839 ABCA10Q8WWZ4 1543 aa34.39■■■■□ 3.1
UBB-203ENST00000395839 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
UBB-203ENST00000395839 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
UBB-203ENST00000395839 CEP170Q5SW79 1584 aa34.31■■■■□ 3.08
UBB-203ENST00000395839 NUP160Q12769 1436 aa34.28■■■■□ 3.08
UBB-203ENST00000395839 ADAMTS12P58397 1594 aa34.15■■■■□ 3.06
UBB-203ENST00000395839 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
UBB-203ENST00000395839 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
UBB-203ENST00000395839 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
UBB-203ENST00000395839 FAM69CQ0P6D2 419 aa34.09■■■■□ 3.05
UBB-203ENST00000395839 KIF13AQ9H1H9 1805 aa34.09■■■■□ 3.05
UBB-203ENST00000395839 PRG4Q92954 1404 aaPredicted RBP34.07■■■■□ 3.04
UBB-203ENST00000395839 JPH4Q96JJ6 628 aa34.03■■■■□ 3.04
UBB-203ENST00000395839 KDM4FA0A1W2PPD8 638 aa33.97■■■■□ 3.03
UBB-203ENST00000395839 ABCC10Q5T3U5 1492 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms