Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LDB2O43679 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LDB2O43679 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.78■□□□□ 0.76
LDB2O43679 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB2O43679 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.78■□□□□ 0.76
LDB2O43679 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 AC120498.8-201ENST00000614275 531 ntBASIC19.78■□□□□ 0.76
LDB2O43679 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB2O43679 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB2O43679 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB2O43679 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.77■□□□□ 0.76
LDB2O43679 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LDB2O43679 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.77■□□□□ 0.76
LDB2O43679 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LDB2O43679 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LDB2O43679 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.77■□□□□ 0.76
LDB2O43679 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LDB2O43679 UNC93B5-201ENST00000530315 699 ntBASIC19.77■□□□□ 0.76
LDB2O43679 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LDB2O43679 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.77■□□□□ 0.76
LDB2O43679 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.77■□□□□ 0.76
LDB2O43679 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LDB2O43679 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.77■□□□□ 0.76
LDB2O43679 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB2O43679 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LDB2O43679 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.77■□□□□ 0.75
LDB2O43679 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LDB2O43679 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LDB2O43679 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB2O43679 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LDB2O43679 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB2O43679 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB2O43679 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB2O43679 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB2O43679 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.76■□□□□ 0.75
LDB2O43679 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDB2O43679 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB2O43679 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LDB2O43679 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LDB2O43679 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.76■□□□□ 0.75
LDB2O43679 UNC93B4-201ENST00000505679 747 ntBASIC19.76■□□□□ 0.75
LDB2O43679 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.76■□□□□ 0.75
LDB2O43679 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB2O43679 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.76■□□□□ 0.75
LDB2O43679 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDB2O43679 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDB2O43679 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB2O43679 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LDB2O43679 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LDB2O43679 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.75■□□□□ 0.75
LDB2O43679 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LDB2O43679 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.75■□□□□ 0.75
LDB2O43679 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.75■□□□□ 0.75
LDB2O43679 AC008687.6-201ENST00000596318 630 ntBASIC19.75■□□□□ 0.75
LDB2O43679 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.75■□□□□ 0.75
LDB2O43679 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LDB2O43679 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.75■□□□□ 0.75
LDB2O43679 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.75■□□□□ 0.75
LDB2O43679 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.75■□□□□ 0.75
LDB2O43679 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB2O43679 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.75■□□□□ 0.75
LDB2O43679 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.74■□□□□ 0.75
LDB2O43679 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.74■□□□□ 0.75
LDB2O43679 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.74■□□□□ 0.75
LDB2O43679 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.74■□□□□ 0.75
LDB2O43679 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms