Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SMURF2-202ENST00000578200 339 ntTSL 56.88□□□□□ -1.312e-6■□□□□ 8.2
PRPF8Q6P2Q9 SETD2-208ENST00000492397 746 ntTSL 36.82□□□□□ -1.322e-6■□□□□ 8.2
PRPF8Q6P2Q9 DMD-210ENST00000378705 714 ntTSL 56.77□□□□□ -1.332e-6■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-207ENST00000489357 444 ntTSL 36.73□□□□□ -1.332e-6■□□□□ 8.2
PRPF8Q6P2Q9 POMT2-205ENST00000554564 725 ntTSL 36.56□□□□□ -1.362e-6■□□□□ 8.2
PRPF8Q6P2Q9 NUP93-215ENST00000567641 604 ntTSL 46.38□□□□□ -1.392e-6■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC5.98□□□□□ -1.452e-6■□□□□ 8.2
PRPF8Q6P2Q9 NPHP3-208ENST00000490993 5197 ntTSL 55.5□□□□□ -1.532e-6■□□□□ 8.2
PRPF8Q6P2Q9 PIGF-204ENST00000420164 586 ntTSL 54.63□□□□□ -1.672e-8■□□□□ 8.2
PRPF8Q6P2Q9 PIP5K1C-207ENST00000636612 153 ntTSL 53.79□□□□□ -1.82e-6■□□□□ 8.2
PRPF8Q6P2Q9 SEC23A-209ENST00000555363 704 ntTSL 23□□□□□ -1.932e-6■□□□□ 8.2
PRPF8Q6P2Q9 LSM2-211ENST00000475835 211 ntTSL 52.34□□□□□ -2.032e-6■□□□□ 8.2
PRPF8Q6P2Q9 SEC23A-207ENST00000554615 3813 ntTSL 1 (best)2.31□□□□□ -2.042e-6■□□□□ 8.2
PRPF8Q6P2Q9 SMURF2-205ENST00000580246 623 ntTSL 21.41□□□□□ -2.182e-6■□□□□ 8.2
PRPF8Q6P2Q9 RYR1-206ENST00000594335 6263 ntTSL 1 (best)12.64□□□□□ -0.392e-6■□□□□ 8.2
PRPF8Q6P2Q9 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.62e-6■□□□□ 8.2
PRPF8Q6P2Q9 MDC1-209ENST00000613547 830 ntTSL 5 BASIC10.99□□□□□ -0.652e-6■□□□□ 8.2
PRPF8Q6P2Q9 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.752e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.752e-6■□□□□ 8.2
PRPF8Q6P2Q9 MDC1-202ENST00000416571 582 ntTSL 38.83□□□□□ -12e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF529-201ENST00000334116 5238 ntTSL 2 BASIC8.71□□□□□ -1.012e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF529-205ENST00000586115 587 ntTSL 48.6□□□□□ -1.032e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF529-203ENST00000585960 535 ntTSL 48.45□□□□□ -1.062e-6■□□□□ 8.2
PRPF8Q6P2Q9 MDC1-205ENST00000425072 582 ntTSL 38.37□□□□□ -1.072e-6■□□□□ 8.2
PRPF8Q6P2Q9 CSPP1-207ENST00000521919 567 ntAPPRIS ALT2 TSL 47.46□□□□□ -1.212e-6■□□□□ 8.2
PRPF8Q6P2Q9 MDC1-204ENST00000422266 583 ntTSL 37.38□□□□□ -1.232e-6■□□□□ 8.2
PRPF8Q6P2Q9 SNORD35A-201ENST00000363389 86 ntBASIC5.99□□□□□ -1.452e-25■□□□□ 8.2
PRPF8Q6P2Q9 ZNF529-204ENST00000585983 582 ntTSL 35.71□□□□□ -1.52e-6■□□□□ 8.2
PRPF8Q6P2Q9 NCKAP1-205ENST00000478449 713 ntTSL 34.34□□□□□ -1.712e-6■□□□□ 8.2
PRPF8Q6P2Q9 CSPP1-204ENST00000519701 569 ntTSL 43.1□□□□□ -1.912e-6■□□□□ 8.2
PRPF8Q6P2Q9 RPL26-202ENST00000578069 456 ntTSL 22.87□□□□□ -1.952e-6■□□□□ 8.2
PRPF8Q6P2Q9 RPL26-211ENST00000584441 328 ntTSL 32.87□□□□□ -1.952e-6■□□□□ 8.2
PRPF8Q6P2Q9 NCKAP1-203ENST00000471640 306 ntTSL 5-0.38□□□□□ -2.472e-6■□□□□ 8.2
PRPF8Q6P2Q9 SLC43A1-208ENST00000533263 690 ntTSL 514.21□□□□□ -0.131e-6■□□□□ 8.2
PRPF8Q6P2Q9 ARHGAP27-218ENST00000582826 278 ntTSL 38.41□□□□□ -1.069e-11■□□□□ 8.2
PRPF8Q6P2Q9 ITIH3-203ENST00000463893 529 ntTSL 47.28□□□□□ -1.249e-11■□□□□ 8.2
PRPF8Q6P2Q9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.65■□□□□ 0.96e-6■□□□□ 8.2
PRPF8Q6P2Q9 VPS37B-203ENST00000535765 879 ntTSL 320■□□□□ 0.796e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-250ENST00000637536 562 ntTSL 419.1■□□□□ 0.656e-6■□□□□ 8.2
PRPF8Q6P2Q9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.19■□□□□ 0.184e-8■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.52■□□□□ 0.086e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-266ENST00000637946 913 ntTSL 515.39■□□□□ 0.056e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-210ENST00000432379 907 ntTSL 315.23■□□□□ 0.036e-6■□□□□ 8.2
PRPF8Q6P2Q9 RTL8A-204ENST00000522309 536 ntTSL 1 (best)15.14■□□□□ 0.014e-8■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-209ENST00000520051 667 ntTSL 514.89□□□□□ -0.036e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.89□□□□□ -0.036e-6■□□□□ 8.2
PRPF8Q6P2Q9 KCNN4-206ENST00000600408 648 ntTSL 214.49□□□□□ -0.094e-8■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-252ENST00000637603 579 ntTSL 414.3□□□□□ -0.126e-6■□□□□ 8.2
PRPF8Q6P2Q9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.126e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-215ENST00000635769 575 ntTSL 414.19□□□□□ -0.146e-6■□□□□ 8.2
PRPF8Q6P2Q9 FERMT3-207ENST00000544997 1006 ntTSL 314.15□□□□□ -0.144e-8■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-212ENST00000523593 586 ntTSL 513.87□□□□□ -0.196e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-205ENST00000518087 918 ntTSL 513.81□□□□□ -0.26e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-244ENST00000637202 1634 ntTSL 513.72□□□□□ -0.216e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-264ENST00000637898 664 ntTSL 213.72□□□□□ -0.216e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-208ENST00000426557 860 ntTSL 412.36□□□□□ -0.436e-6■□□□□ 8.2
PRPF8Q6P2Q9 PLOD1-202ENST00000358133 819 ntTSL 312.19□□□□□ -0.465e-7■□□□□ 8.2
PRPF8Q6P2Q9 ATP1B3-205ENST00000475483 734 ntTSL 312.11□□□□□ -0.474e-8■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC11.54□□□□□ -0.566e-6■□□□□ 8.2
PRPF8Q6P2Q9 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC9.98□□□□□ -0.816e-6■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC9.76□□□□□ -0.856e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-226ENST00000636435 4611 ntTSL 29.74□□□□□ -0.856e-6■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC9.71□□□□□ -0.866e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-209ENST00000429041 603 ntTSL 59.65□□□□□ -0.866e-6■□□□□ 8.2
PRPF8Q6P2Q9 LINC01033-201ENST00000504609 735 ntTSL 5 BASIC9.55□□□□□ -0.886e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.886e-6■□□□□ 8.2
PRPF8Q6P2Q9 CCDC18-AS1-222ENST00000457025 413 ntTSL 58.15□□□□□ -1.16e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-225ENST00000636299 543 ntTSL 48.11□□□□□ -1.116e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-259ENST00000637792 581 ntTSL 48.11□□□□□ -1.116e-6■□□□□ 8.2
PRPF8Q6P2Q9 RTL8A-203ENST00000520964 817 ntTSL 38□□□□□ -1.134e-8■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.166e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC7.6□□□□□ -1.196e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.286e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-203ENST00000374176 5628 ntAPPRIS P5 TSL 1 (best)6.99□□□□□ -1.296e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC6.83□□□□□ -1.326e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-204ENST00000374179 5637 ntTSL 1 (best)6.42□□□□□ -1.386e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC6.36□□□□□ -1.396e-6■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.56e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-260ENST00000637805 780 ntTSL 55.42□□□□□ -1.546e-6■□□□□ 8.2
PRPF8Q6P2Q9 CCDC18-AS1-212ENST00000440778 596 ntTSL 55.31□□□□□ -1.566e-6■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.21□□□□□ -1.586e-6■□□□□ 8.2
PRPF8Q6P2Q9 CCDC18-AS1-218ENST00000450843 600 ntTSL 55.14□□□□□ -1.596e-6■□□□□ 8.2
PRPF8Q6P2Q9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.07□□□□□ -1.66e-6■□□□□ 8.2
PRPF8Q6P2Q9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.02□□□□□ -1.616e-6■□□□□ 8.2
PRPF8Q6P2Q9 RTL8A-202ENST00000518153 762 ntTSL 24.87□□□□□ -1.634e-8■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-238ENST00000636828 3365 ntTSL 24.1□□□□□ -1.756e-6■□□□□ 8.2
PRPF8Q6P2Q9 RPA2-204ENST00000419958 554 ntTSL 34.01□□□□□ -1.776e-6■□□□□ 8.2
PRPF8Q6P2Q9 COPA-204ENST00000481522 578 ntTSL 23.18□□□□□ -1.96e-6■□□□□ 8.2
PRPF8Q6P2Q9 ASAH1-234ENST00000636715 1025 ntTSL 53.07□□□□□ -1.926e-6■□□□□ 8.2
PRPF8Q6P2Q9 RBBP6-213ENST00000613729 1946 nt2.81□□□□□ -1.964e-8■□□□□ 8.2
PRPF8Q6P2Q9 DRAM2-205ENST00000477588 502 ntTSL 32.8□□□□□ -1.966e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.19□□□□□ -2.066e-6■□□□□ 8.2
PRPF8Q6P2Q9 MAPK8-215ENST00000476134 732 ntTSL 30.94□□□□□ -2.266e-6■□□□□ 8.2
PRPF8Q6P2Q9 AL163051.2-201ENST00000618976 735 ntBASIC-0.29□□□□□ -2.464e-8■□□□□ 8.2
PRPF8Q6P2Q9 RICTOR-210ENST00000515846 677 ntTSL 56.07□□□□□ -1.445e-7■□□□□ 8.2
PRPF8Q6P2Q9 TOM1L1-211ENST00000572298 567 ntTSL 47.51□□□□□ -1.215e-7■□□□□ 8.2
PRPF8Q6P2Q9 TOM1L1-212ENST00000572360 576 ntTSL 42.67□□□□□ -1.985e-7■□□□□ 8.2
PRPF8Q6P2Q9 ANKRD11-216ENST00000568924 587 ntTSL 411.54□□□□□ -0.564e-25■□□□□ 8.2
PRPF8Q6P2Q9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.75■■□□□ 1.557e-12■□□□□ 8.1
PRPF8Q6P2Q9 AL713998.1-201ENST00000412872 1605 ntTSL 1 (best) BASIC9.4□□□□□ -0.911e-18■□□□□ 8.1
Retrieved 100 of 73,762 protein–RNA pairs in 2736 ms