RNA–Protein interactions for RNA: ENST00000419958.5

RPA2-204, Transcript of replication protein A2, humanhuman

TSL 3

Gene RPA2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-204ENST00000419958 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
RPA2-204ENST00000419958 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
RPA2-204ENST00000419958 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
RPA2-204ENST00000419958 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
RPA2-204ENST00000419958 FOXD1Q16676 465 aa18.31■□□□□ 0.52
RPA2-204ENST00000419958 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
RPA2-204ENST00000419958 MSH5O43196 834 aa17.37■□□□□ 0.37
RPA2-204ENST00000419958 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
RPA2-204ENST00000419958 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
RPA2-204ENST00000419958 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
RPA2-204ENST00000419958 ADRA2BP18089 450 aa16.7■□□□□ 0.26
RPA2-204ENST00000419958 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
RPA2-204ENST00000419958 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
RPA2-204ENST00000419958 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
RPA2-204ENST00000419958 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
RPA2-204ENST00000419958 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
RPA2-204ENST00000419958 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
RPA2-204ENST00000419958 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
RPA2-204ENST00000419958 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
RPA2-204ENST00000419958 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
RPA2-204ENST00000419958 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
RPA2-204ENST00000419958 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
RPA2-204ENST00000419958 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
RPA2-204ENST00000419958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPA2-204ENST00000419958 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
RPA2-204ENST00000419958 POTEHQ6S545 545 aa13.79□□□□□ -0.2
RPA2-204ENST00000419958 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
RPA2-204ENST00000419958 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
RPA2-204ENST00000419958 CAPN15O75808 1086 aa13.67□□□□□ -0.22
RPA2-204ENST00000419958 DSG3P32926 999 aa13.66□□□□□ -0.22
RPA2-204ENST00000419958 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
RPA2-204ENST00000419958 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
RPA2-204ENST00000419958 APLP2Q06481 763 aa13.34□□□□□ -0.27
RPA2-204ENST00000419958 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
RPA2-204ENST00000419958 ABCB7O75027 752 aa13.29□□□□□ -0.28
RPA2-204ENST00000419958 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
RPA2-204ENST00000419958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
RPA2-204ENST00000419958 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
RPA2-204ENST00000419958 KCNA4P22459 653 aa13.1□□□□□ -0.31
RPA2-204ENST00000419958 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
RPA2-204ENST00000419958 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
RPA2-204ENST00000419958 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
RPA2-204ENST00000419958 POLA2Q14181 598 aa12.86□□□□□ -0.35
RPA2-204ENST00000419958 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
RPA2-204ENST00000419958 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
RPA2-204ENST00000419958 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
RPA2-204ENST00000419958 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
RPA2-204ENST00000419958 REM2Q8IYK8 340 aaPredicted RBP12.54□□□□□ -0.4
RPA2-204ENST00000419958 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
RPA2-204ENST00000419958 HAX1O00165 279 aa12.48□□□□□ -0.41
RPA2-204ENST00000419958 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
RPA2-204ENST00000419958 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
RPA2-204ENST00000419958 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
RPA2-204ENST00000419958 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
RPA2-204ENST00000419958 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPA2-204ENST00000419958 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
RPA2-204ENST00000419958 EVX2Q03828 476 aa12.21□□□□□ -0.45
RPA2-204ENST00000419958 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
RPA2-204ENST00000419958 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
RPA2-204ENST00000419958 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
RPA2-204ENST00000419958 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
RPA2-204ENST00000419958 FBLN2P98095 1184 aa12.1□□□□□ -0.47
RPA2-204ENST00000419958 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
RPA2-204ENST00000419958 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
RPA2-204ENST00000419958 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
RPA2-204ENST00000419958 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
RPA2-204ENST00000419958 ZBTB22O15209 634 aa12□□□□□ -0.49
RPA2-204ENST00000419958 GABBR2O75899 941 aa11.95□□□□□ -0.5
RPA2-204ENST00000419958 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
RPA2-204ENST00000419958 LHX8Q68G74 356 aa11.93□□□□□ -0.5
RPA2-204ENST00000419958 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
RPA2-204ENST00000419958 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
RPA2-204ENST00000419958 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
RPA2-204ENST00000419958 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
RPA2-204ENST00000419958 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPA2-204ENST00000419958 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
RPA2-204ENST00000419958 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
RPA2-204ENST00000419958 CLCN6P51797 869 aa11.65□□□□□ -0.54
RPA2-204ENST00000419958 FARP1Q9Y4F1 1045 aaPredicted RBP11.63□□□□□ -0.55
RPA2-204ENST00000419958 DCBLD2Q96PD2 775 aa11.58□□□□□ -0.56
RPA2-204ENST00000419958 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
RPA2-204ENST00000419958 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
RPA2-204ENST00000419958 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
RPA2-204ENST00000419958 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
RPA2-204ENST00000419958 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
RPA2-204ENST00000419958 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
RPA2-204ENST00000419958 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
RPA2-204ENST00000419958 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
RPA2-204ENST00000419958 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
RPA2-204ENST00000419958 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
RPA2-204ENST00000419958 POTEMA6NI47 508 aa11.26□□□□□ -0.61
RPA2-204ENST00000419958 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
RPA2-204ENST00000419958 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
RPA2-204ENST00000419958 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPA2-204ENST00000419958 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
RPA2-204ENST00000419958 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
RPA2-204ENST00000419958 PCDH10Q9P2E7 1040 aa11.13□□□□□ -0.63
RPA2-204ENST00000419958 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
RPA2-204ENST00000419958 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
RPA2-204ENST00000419958 C7P10643 843 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms