RNA–Protein interactions for RNA: ENST00000478449.5

NCKAP1-205, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-205ENST00000478449 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
NCKAP1-205ENST00000478449 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
NCKAP1-205ENST00000478449 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
NCKAP1-205ENST00000478449 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
NCKAP1-205ENST00000478449 FOXD1Q16676 465 aa17.35■□□□□ 0.37
NCKAP1-205ENST00000478449 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
NCKAP1-205ENST00000478449 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
NCKAP1-205ENST00000478449 ADRA2BP18089 450 aa16.43■□□□□ 0.22
NCKAP1-205ENST00000478449 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
NCKAP1-205ENST00000478449 MSH5O43196 834 aa16.11■□□□□ 0.17
NCKAP1-205ENST00000478449 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
NCKAP1-205ENST00000478449 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
NCKAP1-205ENST00000478449 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
NCKAP1-205ENST00000478449 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
NCKAP1-205ENST00000478449 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
NCKAP1-205ENST00000478449 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
NCKAP1-205ENST00000478449 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
NCKAP1-205ENST00000478449 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
NCKAP1-205ENST00000478449 KCNA4P22459 653 aa14.32□□□□□ -0.12
NCKAP1-205ENST00000478449 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
NCKAP1-205ENST00000478449 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
NCKAP1-205ENST00000478449 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
NCKAP1-205ENST00000478449 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
NCKAP1-205ENST00000478449 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
NCKAP1-205ENST00000478449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■□□□□ 8.9
NCKAP1-205ENST00000478449 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
NCKAP1-205ENST00000478449 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
NCKAP1-205ENST00000478449 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
NCKAP1-205ENST00000478449 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
NCKAP1-205ENST00000478449 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
NCKAP1-205ENST00000478449 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
NCKAP1-205ENST00000478449 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
NCKAP1-205ENST00000478449 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
NCKAP1-205ENST00000478449 CAPN15O75808 1086 aa13.18□□□□□ -0.3
NCKAP1-205ENST00000478449 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
NCKAP1-205ENST00000478449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
NCKAP1-205ENST00000478449 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
NCKAP1-205ENST00000478449 ZBTB22O15209 634 aa13.1□□□□□ -0.31
NCKAP1-205ENST00000478449 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
NCKAP1-205ENST00000478449 APLP2Q06481 763 aa13.06□□□□□ -0.32
NCKAP1-205ENST00000478449 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
NCKAP1-205ENST00000478449 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
NCKAP1-205ENST00000478449 DSG3P32926 999 aa13□□□□□ -0.33
NCKAP1-205ENST00000478449 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
NCKAP1-205ENST00000478449 ABCB7O75027 752 aa12.89□□□□□ -0.35
NCKAP1-205ENST00000478449 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
NCKAP1-205ENST00000478449 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
NCKAP1-205ENST00000478449 POLA2Q14181 598 aa12.74□□□□□ -0.37
NCKAP1-205ENST00000478449 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
NCKAP1-205ENST00000478449 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
NCKAP1-205ENST00000478449 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
NCKAP1-205ENST00000478449 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.44
NCKAP1-205ENST00000478449 FBLN2P98095 1184 aa12.27□□□□□ -0.45
NCKAP1-205ENST00000478449 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
NCKAP1-205ENST00000478449 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
NCKAP1-205ENST00000478449 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
NCKAP1-205ENST00000478449 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
NCKAP1-205ENST00000478449 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
NCKAP1-205ENST00000478449 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
NCKAP1-205ENST00000478449 POTEHQ6S545 545 aa12.06□□□□□ -0.48
NCKAP1-205ENST00000478449 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
NCKAP1-205ENST00000478449 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
NCKAP1-205ENST00000478449 FKBP8Q14318 412 aa11.95□□□□□ -0.5
NCKAP1-205ENST00000478449 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
NCKAP1-205ENST00000478449 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
NCKAP1-205ENST00000478449 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
NCKAP1-205ENST00000478449 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
NCKAP1-205ENST00000478449 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
NCKAP1-205ENST00000478449 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
NCKAP1-205ENST00000478449 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
NCKAP1-205ENST00000478449 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.533e-6■■■□□ 16.4
NCKAP1-205ENST00000478449 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
NCKAP1-205ENST00000478449 PROM2Q8N271 834 aa11.65□□□□□ -0.54
NCKAP1-205ENST00000478449 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
NCKAP1-205ENST00000478449 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
NCKAP1-205ENST00000478449 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
NCKAP1-205ENST00000478449 HAX1O00165 279 aa11.57□□□□□ -0.56
NCKAP1-205ENST00000478449 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
NCKAP1-205ENST00000478449 EVX2Q03828 476 aa11.44□□□□□ -0.58
NCKAP1-205ENST00000478449 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
NCKAP1-205ENST00000478449 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
NCKAP1-205ENST00000478449 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
NCKAP1-205ENST00000478449 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
NCKAP1-205ENST00000478449 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
NCKAP1-205ENST00000478449 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
NCKAP1-205ENST00000478449 MIER1Q8N108 512 aa11.31□□□□□ -0.6
NCKAP1-205ENST00000478449 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
NCKAP1-205ENST00000478449 CD44P16070 742 aaKnown RBP11.28□□□□□ -0.6
NCKAP1-205ENST00000478449 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
NCKAP1-205ENST00000478449 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
NCKAP1-205ENST00000478449 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
NCKAP1-205ENST00000478449 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
NCKAP1-205ENST00000478449 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
NCKAP1-205ENST00000478449 GABBR2O75899 941 aa11.17□□□□□ -0.62
NCKAP1-205ENST00000478449 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
NCKAP1-205ENST00000478449 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
NCKAP1-205ENST00000478449 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
NCKAP1-205ENST00000478449 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
NCKAP1-205ENST00000478449 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
NCKAP1-205ENST00000478449 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms