RNA–Protein interactions for RNA: ENST00000370775.2

RTL8A-201, Transcript of retrotransposon Gag like 8A, humanhuman

APPRIS P1 BASIC

Gene RTL8A, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-201ENST00000370775 NISCHQ9Y2I1 1504 aa46.82■■■■■ 5.09
RTL8A-201ENST00000370775 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.23
RTL8A-201ENST00000370775 ABCC9O60706 1549 aa40.57■■■■■ 4.08
RTL8A-201ENST00000370775 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
RTL8A-201ENST00000370775 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
RTL8A-201ENST00000370775 NACADO15069 1562 aa39.07■■■■□ 3.84
RTL8A-201ENST00000370775 ZCCHC6Q5VYS8 1495 aaKnown RBP38.99■■■■□ 3.83
RTL8A-201ENST00000370775 MYO15BQ96JP2 1530 aa38.85■■■■□ 3.81
RTL8A-201ENST00000370775 DCAF1Q9Y4B6 1507 aa38.73■■■■□ 3.79
RTL8A-201ENST00000370775 UNC13AQ9UPW8 1703 aa38.01■■■■□ 3.68
RTL8A-201ENST00000370775 PABPN1Q86U42 306 aaKnown RBP eCLIP38■■■■□ 3.67
RTL8A-201ENST00000370775 SCRIBQ14160 1630 aa37.92■■■■□ 3.66
RTL8A-201ENST00000370775 BICRAQ9NZM4 1560 aa37.76■■■■□ 3.63
RTL8A-201ENST00000370775 SHROOM4Q9ULL8 1493 aa37.49■■■■□ 3.59
RTL8A-201ENST00000370775 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
RTL8A-201ENST00000370775 EIF4G1Q04637 1599 aaKnown RBP36.83■■■■□ 3.49
RTL8A-201ENST00000370775 CC2D2AQ9P2K1 1620 aa36.64■■■■□ 3.46
RTL8A-201ENST00000370775 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
RTL8A-201ENST00000370775 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
RTL8A-201ENST00000370775 SMARCA4P51532 1647 aa36.26■■■■□ 3.4
RTL8A-201ENST00000370775 SMARCA2P51531 1590 aa36.07■■■■□ 3.37
RTL8A-201ENST00000370775 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
RTL8A-201ENST00000370775 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
RTL8A-201ENST00000370775 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
RTL8A-201ENST00000370775 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
RTL8A-201ENST00000370775 HMGXB3Q12766 1538 aa35.84■■■■□ 3.33
RTL8A-201ENST00000370775 BAZ1BQ9UIG0 1483 aaKnown RBP35.84■■■■□ 3.33
RTL8A-201ENST00000370775 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
RTL8A-201ENST00000370775 WIZO95785 1651 aa35.66■■■■□ 3.3
RTL8A-201ENST00000370775 TOP2AP11388 1531 aaKnown RBP35.33■■■■□ 3.25
RTL8A-201ENST00000370775 SUPT5HO00267 1087 aaKnown RBP35.12■■■■□ 3.21
RTL8A-201ENST00000370775 NESP48681 1621 aa35.09■■■■□ 3.21
RTL8A-201ENST00000370775 LAMC3Q9Y6N6 1575 aa35.07■■■■□ 3.2
RTL8A-201ENST00000370775 CADPSQ9ULU8 1353 aa35.06■■■■□ 3.2
RTL8A-201ENST00000370775 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
RTL8A-201ENST00000370775 CCDC88BA6NC98 1476 aa34.95■■■■□ 3.19
RTL8A-201ENST00000370775 PDS5BQ9NTI5 1447 aa34.93■■■■□ 3.18
RTL8A-201ENST00000370775 CFTRP13569 1480 aa34.82■■■■□ 3.16
RTL8A-201ENST00000370775 KIF21AQ7Z4S6 1674 aa34.63■■■■□ 3.13
RTL8A-201ENST00000370775 FANCD2Q9BXW9 1451 aa34.62■■■■□ 3.13
RTL8A-201ENST00000370775 CEP164Q9UPV0 1460 aa34.58■■■■□ 3.13
RTL8A-201ENST00000370775 CUX2O14529 1486 aa34.54■■■■□ 3.12
RTL8A-201ENST00000370775 MRC2Q9UBG0 1479 aa34.48■■■■□ 3.11
RTL8A-201ENST00000370775 THOC2Q8NI27 1593 aaKnown RBP34.46■■■■□ 3.11
RTL8A-201ENST00000370775 PRDM2Q13029 1718 aa34.46■■■■□ 3.11
RTL8A-201ENST00000370775 WDR62O43379 1518 aa34.3■■■■□ 3.08
RTL8A-201ENST00000370775 URB2Q14146 1524 aaKnown RBP34.2■■■■□ 3.07
RTL8A-201ENST00000370775 ABCC8Q09428 1581 aa34.17■■■■□ 3.06
RTL8A-201ENST00000370775 TOPBP1Q92547 1522 aa34.05■■■■□ 3.04
RTL8A-201ENST00000370775 DNMBPQ6XZF7 1577 aa34.02■■■■□ 3.04
RTL8A-201ENST00000370775 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
RTL8A-201ENST00000370775 CUX1P39880 1505 aa33.82■■■■□ 3
RTL8A-201ENST00000370775 POLA1P09884 1462 aaPredicted RBP33.76■■■■□ 3
RTL8A-201ENST00000370775 WRNQ14191 1432 aaPredicted RBP eCLIP33.75■■■□□ 2.99
RTL8A-201ENST00000370775 SOGA1O94964 1423 aa33.73■■■□□ 2.99
RTL8A-201ENST00000370775 FGD5Q6ZNL6 1462 aa33.73■■■□□ 2.99
RTL8A-201ENST00000370775 RAD54L2Q9Y4B4 1467 aa33.64■■■□□ 2.98
RTL8A-201ENST00000370775 ZNF608Q9ULD9 1512 aaPredicted RBP33.61■■■□□ 2.97
RTL8A-201ENST00000370775 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
RTL8A-201ENST00000370775 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
RTL8A-201ENST00000370775 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
RTL8A-201ENST00000370775 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
RTL8A-201ENST00000370775 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.962e-9■■■■■ 56.7
RTL8A-201ENST00000370775 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
RTL8A-201ENST00000370775 EIF4G3O43432 1585 aaKnown RBP33.47■■■□□ 2.95
RTL8A-201ENST00000370775 WDR97A6NE52 1622 aa33.42■■■□□ 2.94
RTL8A-201ENST00000370775 ABCA10Q8WWZ4 1543 aa33.4■■■□□ 2.94
RTL8A-201ENST00000370775 DNAJC5Q9H3Z4 198 aa33.35■■■□□ 2.93
RTL8A-201ENST00000370775 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
RTL8A-201ENST00000370775 GRIN2BQ13224 1484 aa33.29■■■□□ 2.92
RTL8A-201ENST00000370775 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
RTL8A-201ENST00000370775 FBLN2P98095 1184 aa33.24■■■□□ 2.91
RTL8A-201ENST00000370775 TRIM41Q8WV44 630 aa33.21■■■□□ 2.91
RTL8A-201ENST00000370775 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
RTL8A-201ENST00000370775 ABCA5Q8WWZ7 1642 aa33.18■■■□□ 2.9
RTL8A-201ENST00000370775 MAGI1Q96QZ7 1491 aaPredicted RBP33.17■■■□□ 2.9
RTL8A-201ENST00000370775 CHMP7Q8WUX9 453 aaPredicted RBP33.16■■■□□ 2.9
RTL8A-201ENST00000370775 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
RTL8A-201ENST00000370775 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
RTL8A-201ENST00000370775 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
RTL8A-201ENST00000370775 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
RTL8A-201ENST00000370775 CHD1O14646 1710 aa32.99■■■□□ 2.87
RTL8A-201ENST00000370775 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
RTL8A-201ENST00000370775 ADAMTS12P58397 1594 aa32.87■■■□□ 2.85
RTL8A-201ENST00000370775 IGF1RP08069 1367 aa32.87■■■□□ 2.85
RTL8A-201ENST00000370775 GRIN2AQ12879 1464 aa32.82■■■□□ 2.84
RTL8A-201ENST00000370775 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
RTL8A-201ENST00000370775 CARMIL1Q5VZK9 1371 aa32.73■■■□□ 2.83
RTL8A-201ENST00000370775 CUL7Q14999 1698 aa32.73■■■□□ 2.83
RTL8A-201ENST00000370775 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
RTL8A-201ENST00000370775 NUP160Q12769 1436 aa32.65■■■□□ 2.82
RTL8A-201ENST00000370775 CLASP1Q7Z460 1538 aa32.65■■■□□ 2.82
RTL8A-201ENST00000370775 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
RTL8A-201ENST00000370775 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
RTL8A-201ENST00000370775 EEA1Q15075 1411 aa32.55■■■□□ 2.8
RTL8A-201ENST00000370775 CSRNP3Q8WYN3 585 aa32.54■■■□□ 2.8
RTL8A-201ENST00000370775 RAPGEF2Q9Y4G8 1499 aa32.54■■■□□ 2.8
RTL8A-201ENST00000370775 RIMBP3CA6NJZ7 1639 aa32.52■■■□□ 2.8
RTL8A-201ENST00000370775 RIMBP3BA6NNM3 1639 aa32.52■■■□□ 2.8
RTL8A-201ENST00000370775 RIMBP3Q9UFD9 1639 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms