RNA–Protein interactions for RNA: ENST00000378705.3

DMD-210, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-210ENST00000378705 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
DMD-210ENST00000378705 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
DMD-210ENST00000378705 ABCC9O60706 1549 aa16.77■□□□□ 0.28
DMD-210ENST00000378705 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
DMD-210ENST00000378705 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
DMD-210ENST00000378705 NACADO15069 1562 aa16.13■□□□□ 0.17
DMD-210ENST00000378705 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
DMD-210ENST00000378705 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
DMD-210ENST00000378705 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
DMD-210ENST00000378705 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
DMD-210ENST00000378705 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
DMD-210ENST00000378705 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
DMD-210ENST00000378705 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
DMD-210ENST00000378705 SCRIBQ14160 1630 aa15.67■□□□□ 0.1
DMD-210ENST00000378705 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
DMD-210ENST00000378705 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
DMD-210ENST00000378705 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
DMD-210ENST00000378705 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
DMD-210ENST00000378705 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
DMD-210ENST00000378705 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
DMD-210ENST00000378705 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
DMD-210ENST00000378705 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
DMD-210ENST00000378705 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
DMD-210ENST00000378705 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
DMD-210ENST00000378705 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
DMD-210ENST00000378705 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
DMD-210ENST00000378705 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
DMD-210ENST00000378705 HMGXB3Q12766 1538 aa14.8□□□□□ -0.04
DMD-210ENST00000378705 WIZO95785 1651 aa14.77□□□□□ -0.05
DMD-210ENST00000378705 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
DMD-210ENST00000378705 RSF1Q96T23 1441 aaPredicted RBP14.73□□□□□ -0.05
DMD-210ENST00000378705 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
DMD-210ENST00000378705 NESP48681 1621 aa14.54□□□□□ -0.08
DMD-210ENST00000378705 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
DMD-210ENST00000378705 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
DMD-210ENST00000378705 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
DMD-210ENST00000378705 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
DMD-210ENST00000378705 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
DMD-210ENST00000378705 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
DMD-210ENST00000378705 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
DMD-210ENST00000378705 CFTRP13569 1480 aa14.37□□□□□ -0.11
DMD-210ENST00000378705 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
DMD-210ENST00000378705 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
DMD-210ENST00000378705 CUX2O14529 1486 aa14.27□□□□□ -0.12
DMD-210ENST00000378705 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
DMD-210ENST00000378705 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
DMD-210ENST00000378705 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
DMD-210ENST00000378705 WDR62O43379 1518 aa14.2□□□□□ -0.14
DMD-210ENST00000378705 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
DMD-210ENST00000378705 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
DMD-210ENST00000378705 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
DMD-210ENST00000378705 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
DMD-210ENST00000378705 CUX1P39880 1505 aa13.97□□□□□ -0.17
DMD-210ENST00000378705 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
DMD-210ENST00000378705 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
DMD-210ENST00000378705 TARBP1Q13395 1621 aaKnown RBP13.92□□□□□ -0.18
DMD-210ENST00000378705 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
DMD-210ENST00000378705 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
DMD-210ENST00000378705 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
DMD-210ENST00000378705 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
DMD-210ENST00000378705 TOP2BQ02880 1626 aa13.9□□□□□ -0.19
DMD-210ENST00000378705 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.19
DMD-210ENST00000378705 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
DMD-210ENST00000378705 SOGA1O94964 1423 aa13.89□□□□□ -0.19
DMD-210ENST00000378705 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
DMD-210ENST00000378705 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
DMD-210ENST00000378705 WDR97A6NE52 1622 aa13.83□□□□□ -0.2
DMD-210ENST00000378705 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
DMD-210ENST00000378705 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
DMD-210ENST00000378705 HRCP23327 699 aa13.78□□□□□ -0.2
DMD-210ENST00000378705 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.21
DMD-210ENST00000378705 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
DMD-210ENST00000378705 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
DMD-210ENST00000378705 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
DMD-210ENST00000378705 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
DMD-210ENST00000378705 GRIN2BQ13224 1484 aa13.71□□□□□ -0.21
DMD-210ENST00000378705 CHD1O14646 1710 aa13.7□□□□□ -0.22
DMD-210ENST00000378705 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
DMD-210ENST00000378705 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
DMD-210ENST00000378705 FBLN2P98095 1184 aa13.64□□□□□ -0.23
DMD-210ENST00000378705 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
DMD-210ENST00000378705 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
DMD-210ENST00000378705 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
DMD-210ENST00000378705 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
DMD-210ENST00000378705 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
DMD-210ENST00000378705 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
DMD-210ENST00000378705 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
DMD-210ENST00000378705 CUL7Q14999 1698 aa13.54□□□□□ -0.24
DMD-210ENST00000378705 IGF1RP08069 1367 aa13.54□□□□□ -0.24
DMD-210ENST00000378705 GRIN2AQ12879 1464 aa13.54□□□□□ -0.24
DMD-210ENST00000378705 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
DMD-210ENST00000378705 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
DMD-210ENST00000378705 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
DMD-210ENST00000378705 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
DMD-210ENST00000378705 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
DMD-210ENST00000378705 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
DMD-210ENST00000378705 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
DMD-210ENST00000378705 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
DMD-210ENST00000378705 NUP160Q12769 1436 aa13.47□□□□□ -0.25
DMD-210ENST00000378705 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms