RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
CLCC1-204ENST00000369968 HRCP23327 699 aa11.09□□□□□ -0.63
CLCC1-204ENST00000369968 MYO15BQ96JP2 1530 aa11.08□□□□□ -0.64
CLCC1-204ENST00000369968 PPARGC1BQ86YN6 1023 aaKnown RBP10.88□□□□□ -0.67
CLCC1-204ENST00000369968 SCAF1Q9H7N4 1312 aaKnown RBP10.72□□□□□ -0.69
CLCC1-204ENST00000369968 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
CLCC1-204ENST00000369968 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.69
CLCC1-204ENST00000369968 CCDC180Q9P1Z9 1646 aa10.61□□□□□ -0.71
CLCC1-204ENST00000369968 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
CLCC1-204ENST00000369968 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
CLCC1-204ENST00000369968 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.74
CLCC1-204ENST00000369968 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
CLCC1-204ENST00000369968 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
CLCC1-204ENST00000369968 AEBP2Q6ZN18 517 aaPredicted RBP10.26□□□□□ -0.77
CLCC1-204ENST00000369968 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
CLCC1-204ENST00000369968 MYT1Q01538 1121 aa10.24□□□□□ -0.77
CLCC1-204ENST00000369968 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
CLCC1-204ENST00000369968 ACIN1Q9UKV3 1341 aaKnown RBP10.2□□□□□ -0.78
CLCC1-204ENST00000369968 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
CLCC1-204ENST00000369968 LOC105371045A0A1W2PR82 267 aa10.17□□□□□ -0.78
CLCC1-204ENST00000369968 GTF3C3Q9Y5Q9 886 aa10.06□□□□□ -0.8
CLCC1-204ENST00000369968 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
CLCC1-204ENST00000369968 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
CLCC1-204ENST00000369968 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
CLCC1-204ENST00000369968 BCL11AQ9H165 835 aa9.89□□□□□ -0.83
CLCC1-204ENST00000369968 ABCC9O60706 1549 aa9.85□□□□□ -0.83
CLCC1-204ENST00000369968 TTBK1Q5TCY1 1321 aaPredicted RBP9.79□□□□□ -0.84
CLCC1-204ENST00000369968 EIF4G1Q04637 1599 aaKnown RBP9.79□□□□□ -0.84
CLCC1-204ENST00000369968 DIEXFQ68CQ4 756 aaKnown RBP9.78□□□□□ -0.84
CLCC1-204ENST00000369968 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
CLCC1-204ENST00000369968 RB1CC1Q8TDY2 1594 aa9.77□□□□□ -0.85
CLCC1-204ENST00000369968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
CLCC1-204ENST00000369968 TSHZ2Q9NRE2 1034 aa9.7□□□□□ -0.86
CLCC1-204ENST00000369968 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
CLCC1-204ENST00000369968 ANP32EQ9BTT0 268 aa9.7□□□□□ -0.86
CLCC1-204ENST00000369968 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
CLCC1-204ENST00000369968 WRNQ14191 1432 aaPredicted RBP eCLIP9.65□□□□□ -0.86
CLCC1-204ENST00000369968 MIER1Q8N108 512 aa9.65□□□□□ -0.86
CLCC1-204ENST00000369968 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
CLCC1-204ENST00000369968 RSF1Q96T23 1441 aaPredicted RBP9.63□□□□□ -0.87
CLCC1-204ENST00000369968 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
CLCC1-204ENST00000369968 MSH5O43196 834 aa9.52□□□□□ -0.89
CLCC1-204ENST00000369968 CCER1Q8TC90 406 aaPredicted RBP9.5□□□□□ -0.89
CLCC1-204ENST00000369968 YTHDC1Q96MU7 727 aaKnown RBP9.49□□□□□ -0.89
CLCC1-204ENST00000369968 APLP2Q06481 763 aa9.47□□□□□ -0.89
CLCC1-204ENST00000369968 NACADO15069 1562 aa9.46□□□□□ -0.89
CLCC1-204ENST00000369968 PABPN1Q86U42 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLCC1-204ENST00000369968 ABCC8Q09428 1581 aa9.41□□□□□ -0.9
CLCC1-204ENST00000369968 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
CLCC1-204ENST00000369968 WIZO95785 1651 aa9.41□□□□□ -0.9
CLCC1-204ENST00000369968 CEP162Q5TB80 1403 aa9.39□□□□□ -0.91
CLCC1-204ENST00000369968 MROH2BQ7Z745 1585 aa9.36□□□□□ -0.91
CLCC1-204ENST00000369968 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
CLCC1-204ENST00000369968 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
CLCC1-204ENST00000369968 BAZ1AQ9NRL2 1556 aaPredicted RBP9.34□□□□□ -0.91
CLCC1-204ENST00000369968 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
CLCC1-204ENST00000369968 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
CLCC1-204ENST00000369968 SCRIBQ14160 1630 aa9.32□□□□□ -0.92
CLCC1-204ENST00000369968 RUSC2Q8N2Y8 1516 aa9.31□□□□□ -0.92
CLCC1-204ENST00000369968 CECR2Q9BXF3 1484 aa9.31□□□□□ -0.92
CLCC1-204ENST00000369968 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
CLCC1-204ENST00000369968 TNIKQ9UKE5 1360 aa9.29□□□□□ -0.92
CLCC1-204ENST00000369968 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
CLCC1-204ENST00000369968 CUX2O14529 1486 aa9.27□□□□□ -0.93
CLCC1-204ENST00000369968 SOGA1O94964 1423 aa9.27□□□□□ -0.93
CLCC1-204ENST00000369968 MAPKBP1O60336 1514 aa9.25□□□□□ -0.93
CLCC1-204ENST00000369968 FANCIQ9NVI1 1328 aa9.23□□□□□ -0.93
CLCC1-204ENST00000369968 KIF21BO75037 1637 aa9.23□□□□□ -0.93
CLCC1-204ENST00000369968 SMARCA2P51531 1590 aa9.2□□□□□ -0.94
CLCC1-204ENST00000369968 SALL2Q9Y467 1007 aaPredicted RBP9.18□□□□□ -0.94
CLCC1-204ENST00000369968 CLIP1P30622 1438 aa9.17□□□□□ -0.94
CLCC1-204ENST00000369968 WDR97A6NE52 1622 aa9.15□□□□□ -0.94
CLCC1-204ENST00000369968 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
CLCC1-204ENST00000369968 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
CLCC1-204ENST00000369968 BCANQ96GW7 911 aa9.12□□□□□ -0.95
CLCC1-204ENST00000369968 FKBP8Q14318 412 aa9.11□□□□□ -0.95
CLCC1-204ENST00000369968 VPS8Q8N3P4 1428 aa9.11□□□□□ -0.95
CLCC1-204ENST00000369968 KDM5BQ9UGL1 1544 aa9.11□□□□□ -0.95
CLCC1-204ENST00000369968 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
CLCC1-204ENST00000369968 GOLGA3Q08378 1498 aa9.1□□□□□ -0.95
CLCC1-204ENST00000369968 DEKP35659 375 aaKnown RBP9.1□□□□□ -0.95
CLCC1-204ENST00000369968 ERICH6Q7L0X2 663 aa9.1□□□□□ -0.95
CLCC1-204ENST00000369968 UBE2Q2Q8WVN8 375 aa9.1□□□□□ -0.95
CLCC1-204ENST00000369968 PPP1R15AO75807 674 aaPredicted RBP9.1□□□□□ -0.95
CLCC1-204ENST00000369968 NCAPD3P42695 1498 aa9.1□□□□□ -0.95
CLCC1-204ENST00000369968 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
CLCC1-204ENST00000369968 ITGAEP38570 1179 aa9.09□□□□□ -0.95
CLCC1-204ENST00000369968 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
CLCC1-204ENST00000369968 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
CLCC1-204ENST00000369968 EEA1Q15075 1411 aa9.07□□□□□ -0.96
CLCC1-204ENST00000369968 ARAP1Q96P48 1450 aa9.06□□□□□ -0.96
CLCC1-204ENST00000369968 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
CLCC1-204ENST00000369968 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
CLCC1-204ENST00000369968 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
CLCC1-204ENST00000369968 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
CLCC1-204ENST00000369968 CCDC136Q96JN2 1154 aa9.02□□□□□ -0.97
CLCC1-204ENST00000369968 ATP1B4Q9UN42 357 aaPredicted RBP9.02□□□□□ -0.97
CLCC1-204ENST00000369968 RAPGEF2Q9Y4G8 1499 aa9.01□□□□□ -0.97
CLCC1-204ENST00000369968 SMARCA4P51532 1647 aa9.01□□□□□ -0.97
CLCC1-204ENST00000369968 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms