RNA–Protein interactions for RNA: ENST00000533263.1

SLC43A1-208, Transcript of solute carrier family 43 member 1, humanhuman

TSL 5

Gene SLC43A1, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-208ENST00000533263 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
SLC43A1-208ENST00000533263 CCDC180Q9P1Z9 1646 aa36.65■■■■□ 3.46
SLC43A1-208ENST00000533263 ABCC9O60706 1549 aa36.52■■■■□ 3.44
SLC43A1-208ENST00000533263 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
SLC43A1-208ENST00000533263 NACADO15069 1562 aa34.69■■■■□ 3.14
SLC43A1-208ENST00000533263 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
SLC43A1-208ENST00000533263 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
SLC43A1-208ENST00000533263 DNAJC5BQ9UF47 199 aa34.17■■■■□ 3.06
SLC43A1-208ENST00000533263 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.04
SLC43A1-208ENST00000533263 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
SLC43A1-208ENST00000533263 DCAF1Q9Y4B6 1507 aa33.92■■■■□ 3.02
SLC43A1-208ENST00000533263 UNC13AQ9UPW8 1703 aa33.92■■■■□ 3.02
SLC43A1-208ENST00000533263 BICRAQ9NZM4 1560 aa33.81■■■■□ 3
SLC43A1-208ENST00000533263 SHROOM4Q9ULL8 1493 aa33.47■■■□□ 2.95
SLC43A1-208ENST00000533263 SCRIBQ14160 1630 aa33.37■■■□□ 2.93
SLC43A1-208ENST00000533263 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
SLC43A1-208ENST00000533263 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
SLC43A1-208ENST00000533263 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
SLC43A1-208ENST00000533263 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
SLC43A1-208ENST00000533263 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
SLC43A1-208ENST00000533263 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
SLC43A1-208ENST00000533263 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
SLC43A1-208ENST00000533263 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
SLC43A1-208ENST00000533263 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
SLC43A1-208ENST00000533263 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
SLC43A1-208ENST00000533263 BAZ1BQ9UIG0 1483 aaKnown RBP31.63■■■□□ 2.65
SLC43A1-208ENST00000533263 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
SLC43A1-208ENST00000533263 ERCC6Q03468 1493 aa31.55■■■□□ 2.64
SLC43A1-208ENST00000533263 CUX2O14529 1486 aa31.47■■■□□ 2.63
SLC43A1-208ENST00000533263 NESP48681 1621 aa31.41■■■□□ 2.62
SLC43A1-208ENST00000533263 DNAJC5Q9H3Z4 198 aa31.33■■■□□ 2.61
SLC43A1-208ENST00000533263 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
SLC43A1-208ENST00000533263 PDS5BQ9NTI5 1447 aa31.13■■■□□ 2.57
SLC43A1-208ENST00000533263 WIZO95785 1651 aa31.13■■■□□ 2.57
SLC43A1-208ENST00000533263 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
SLC43A1-208ENST00000533263 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
SLC43A1-208ENST00000533263 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.55
SLC43A1-208ENST00000533263 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
SLC43A1-208ENST00000533263 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
SLC43A1-208ENST00000533263 MRC2Q9UBG0 1479 aa30.8■■■□□ 2.52
SLC43A1-208ENST00000533263 CFTRP13569 1480 aa30.76■■■□□ 2.51
SLC43A1-208ENST00000533263 WDR62O43379 1518 aa30.71■■■□□ 2.51
SLC43A1-208ENST00000533263 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
SLC43A1-208ENST00000533263 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.5
SLC43A1-208ENST00000533263 CCDC88BA6NC98 1476 aa30.48■■■□□ 2.47
SLC43A1-208ENST00000533263 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
SLC43A1-208ENST00000533263 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
SLC43A1-208ENST00000533263 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
SLC43A1-208ENST00000533263 OSCARQ8IYS5 282 aa30.12■■■□□ 2.41
SLC43A1-208ENST00000533263 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
SLC43A1-208ENST00000533263 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
SLC43A1-208ENST00000533263 DNMBPQ6XZF7 1577 aa30■■■□□ 2.39
SLC43A1-208ENST00000533263 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
SLC43A1-208ENST00000533263 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
SLC43A1-208ENST00000533263 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
SLC43A1-208ENST00000533263 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
SLC43A1-208ENST00000533263 EIF4G3O43432 1585 aaKnown RBP29.79■■■□□ 2.36
SLC43A1-208ENST00000533263 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.361e-8■■■■□ 20
SLC43A1-208ENST00000533263 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
SLC43A1-208ENST00000533263 SOGA1O94964 1423 aa29.72■■■□□ 2.35
SLC43A1-208ENST00000533263 RAD54L2Q9Y4B4 1467 aa29.69■■■□□ 2.34
SLC43A1-208ENST00000533263 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.34
SLC43A1-208ENST00000533263 CUX1P39880 1505 aa29.64■■■□□ 2.34
SLC43A1-208ENST00000533263 TDRD9Q8NDG6 1382 aaKnown RBP29.63■■■□□ 2.33
SLC43A1-208ENST00000533263 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
SLC43A1-208ENST00000533263 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
SLC43A1-208ENST00000533263 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
SLC43A1-208ENST00000533263 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
SLC43A1-208ENST00000533263 FBLN2P98095 1184 aa29.55■■■□□ 2.32
SLC43A1-208ENST00000533263 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
SLC43A1-208ENST00000533263 CHD1O14646 1710 aa29.49■■■□□ 2.31
SLC43A1-208ENST00000533263 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
SLC43A1-208ENST00000533263 GRIN2BQ13224 1484 aa29.44■■■□□ 2.3
SLC43A1-208ENST00000533263 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
SLC43A1-208ENST00000533263 CHMP7Q8WUX9 453 aaPredicted RBP29.41■■■□□ 2.3
SLC43A1-208ENST00000533263 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
SLC43A1-208ENST00000533263 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
SLC43A1-208ENST00000533263 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
SLC43A1-208ENST00000533263 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
SLC43A1-208ENST00000533263 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
SLC43A1-208ENST00000533263 SYNJ1O43426 1573 aa29.26■■■□□ 2.27
SLC43A1-208ENST00000533263 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
SLC43A1-208ENST00000533263 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
SLC43A1-208ENST00000533263 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
SLC43A1-208ENST00000533263 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
SLC43A1-208ENST00000533263 PBRM1Q86U86 1689 aa29.2■■■□□ 2.26
SLC43A1-208ENST00000533263 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
SLC43A1-208ENST00000533263 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
SLC43A1-208ENST00000533263 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
SLC43A1-208ENST00000533263 ADAMTS12P58397 1594 aa29■■■□□ 2.23
SLC43A1-208ENST00000533263 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
SLC43A1-208ENST00000533263 NUP160Q12769 1436 aa28.97■■■□□ 2.23
SLC43A1-208ENST00000533263 TRHP20396 242 aaPredicted RBP28.96■■■□□ 2.23
SLC43A1-208ENST00000533263 CEP170Q5SW79 1584 aa28.88■■■□□ 2.21
SLC43A1-208ENST00000533263 ERCC6L2Q5T890 1561 aa28.77■■■□□ 2.2
SLC43A1-208ENST00000533263 SHROOM2Q13796 1616 aa28.76■■■□□ 2.19
SLC43A1-208ENST00000533263 JPH4Q96JJ6 628 aa28.71■■■□□ 2.19
SLC43A1-208ENST00000533263 KIF27Q86VH2 1401 aa28.7■■■□□ 2.19
SLC43A1-208ENST00000533263 IGF1RP08069 1367 aa28.7■■■□□ 2.18
SLC43A1-208ENST00000533263 PRG4Q92954 1404 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms