RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
TOM1L1-212ENST00000572360 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
TOM1L1-212ENST00000572360 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
TOM1L1-212ENST00000572360 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
TOM1L1-212ENST00000572360 FOXD1Q16676 465 aa17.7■□□□□ 0.42
TOM1L1-212ENST00000572360 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
TOM1L1-212ENST00000572360 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
TOM1L1-212ENST00000572360 ADRA2BP18089 450 aa16.59■□□□□ 0.25
TOM1L1-212ENST00000572360 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
TOM1L1-212ENST00000572360 MSH5O43196 834 aa16.38■□□□□ 0.21
TOM1L1-212ENST00000572360 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
TOM1L1-212ENST00000572360 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
TOM1L1-212ENST00000572360 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
TOM1L1-212ENST00000572360 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
TOM1L1-212ENST00000572360 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
TOM1L1-212ENST00000572360 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
TOM1L1-212ENST00000572360 CNKSR2Q8WXI2 1034 aa14.56□□□□□ -0.08
TOM1L1-212ENST00000572360 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
TOM1L1-212ENST00000572360 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
TOM1L1-212ENST00000572360 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
TOM1L1-212ENST00000572360 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
TOM1L1-212ENST00000572360 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
TOM1L1-212ENST00000572360 KCNA4P22459 653 aa14.02□□□□□ -0.17
TOM1L1-212ENST00000572360 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
TOM1L1-212ENST00000572360 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
TOM1L1-212ENST00000572360 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
TOM1L1-212ENST00000572360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
TOM1L1-212ENST00000572360 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
TOM1L1-212ENST00000572360 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
TOM1L1-212ENST00000572360 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
TOM1L1-212ENST00000572360 DSG3P32926 999 aa13.23□□□□□ -0.29
TOM1L1-212ENST00000572360 CAPN15O75808 1086 aa13.22□□□□□ -0.29
TOM1L1-212ENST00000572360 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
TOM1L1-212ENST00000572360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
TOM1L1-212ENST00000572360 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
TOM1L1-212ENST00000572360 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-212ENST00000572360 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
TOM1L1-212ENST00000572360 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
TOM1L1-212ENST00000572360 ZBTB22O15209 634 aa12.99□□□□□ -0.33
TOM1L1-212ENST00000572360 ABCB7O75027 752 aa12.99□□□□□ -0.33
TOM1L1-212ENST00000572360 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
TOM1L1-212ENST00000572360 APLP2Q06481 763 aa12.98□□□□□ -0.33
TOM1L1-212ENST00000572360 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
TOM1L1-212ENST00000572360 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
TOM1L1-212ENST00000572360 POLA2Q14181 598 aa12.77□□□□□ -0.37
TOM1L1-212ENST00000572360 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
TOM1L1-212ENST00000572360 POTEHQ6S545 545 aa12.46□□□□□ -0.41
TOM1L1-212ENST00000572360 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
TOM1L1-212ENST00000572360 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
TOM1L1-212ENST00000572360 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
TOM1L1-212ENST00000572360 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
TOM1L1-212ENST00000572360 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
TOM1L1-212ENST00000572360 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
TOM1L1-212ENST00000572360 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
TOM1L1-212ENST00000572360 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
TOM1L1-212ENST00000572360 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
TOM1L1-212ENST00000572360 FBLN2P98095 1184 aa12.14□□□□□ -0.47
TOM1L1-212ENST00000572360 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
TOM1L1-212ENST00000572360 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
TOM1L1-212ENST00000572360 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
TOM1L1-212ENST00000572360 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
TOM1L1-212ENST00000572360 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
TOM1L1-212ENST00000572360 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
TOM1L1-212ENST00000572360 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
TOM1L1-212ENST00000572360 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
TOM1L1-212ENST00000572360 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
TOM1L1-212ENST00000572360 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
TOM1L1-212ENST00000572360 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
TOM1L1-212ENST00000572360 EVX2Q03828 476 aa11.74□□□□□ -0.53
TOM1L1-212ENST00000572360 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
TOM1L1-212ENST00000572360 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
TOM1L1-212ENST00000572360 HAX1O00165 279 aa11.68□□□□□ -0.54
TOM1L1-212ENST00000572360 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
TOM1L1-212ENST00000572360 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
TOM1L1-212ENST00000572360 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
TOM1L1-212ENST00000572360 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
TOM1L1-212ENST00000572360 PROM2Q8N271 834 aa11.49□□□□□ -0.57
TOM1L1-212ENST00000572360 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
TOM1L1-212ENST00000572360 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
TOM1L1-212ENST00000572360 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
TOM1L1-212ENST00000572360 GABBR2O75899 941 aa11.38□□□□□ -0.59
TOM1L1-212ENST00000572360 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
TOM1L1-212ENST00000572360 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
TOM1L1-212ENST00000572360 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
TOM1L1-212ENST00000572360 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
TOM1L1-212ENST00000572360 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
TOM1L1-212ENST00000572360 FKBP8Q14318 412 aa11.16□□□□□ -0.62
TOM1L1-212ENST00000572360 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
TOM1L1-212ENST00000572360 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
TOM1L1-212ENST00000572360 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
TOM1L1-212ENST00000572360 CLCN6P51797 869 aa11.1□□□□□ -0.63
TOM1L1-212ENST00000572360 MIER1Q8N108 512 aa11.04□□□□□ -0.64
TOM1L1-212ENST00000572360 CCDC61Q9Y6R9 512 aa11.01□□□□□ -0.65
TOM1L1-212ENST00000572360 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
TOM1L1-212ENST00000572360 RASEFQ8IZ41 740 aa11□□□□□ -0.65
TOM1L1-212ENST00000572360 LHX8Q68G74 356 aa10.98□□□□□ -0.65
TOM1L1-212ENST00000572360 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
TOM1L1-212ENST00000572360 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
TOM1L1-212ENST00000572360 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
TOM1L1-212ENST00000572360 NUBP1P53384 320 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms