RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 MYT1Q01538 1121 aa7.31□□□□□ -1.24
LSM2-211ENST00000475835 PELP1Q8IZL8 1130 aaKnown RBP7.21□□□□□ -1.26
LSM2-211ENST00000475835 TTBK1Q5TCY1 1321 aaPredicted RBP7.2□□□□□ -1.26
LSM2-211ENST00000475835 SLC24A1O60721 1099 aa7.1□□□□□ -1.27
LSM2-211ENST00000475835 ERICH6Q7L0X2 663 aa6.79□□□□□ -1.32
LSM2-211ENST00000475835 DAXXQ9UER7 740 aaPredicted RBP6.74□□□□□ -1.33
LSM2-211ENST00000475835 APLP2Q06481 763 aa6.73□□□□□ -1.33
LSM2-211ENST00000475835 PRKCSHP14314 528 aaPredicted RBP6.64□□□□□ -1.35
LSM2-211ENST00000475835 NISCHQ9Y2I1 1504 aa6.45□□□□□ -1.38
LSM2-211ENST00000475835 NCBP3Q53F19 620 aaKnown RBP6.41□□□□□ -1.38
LSM2-211ENST00000475835 ARXQ96QS3 562 aa6.3□□□□□ -1.4
LSM2-211ENST00000475835 EIF5BO60841 1220 aaKnown RBP6.27□□□□□ -1.41
LSM2-211ENST00000475835 BCL11AQ9H165 835 aa6.25□□□□□ -1.41
LSM2-211ENST00000475835 RANGAP1P46060 587 aaPredicted RBP6.2□□□□□ -1.42
LSM2-211ENST00000475835 AMER1Q5JTC6 1135 aaPredicted RBP6.09□□□□□ -1.43
LSM2-211ENST00000475835 FAM9AQ8IZU1 332 aaPredicted RBP6.08□□□□□ -1.44
LSM2-211ENST00000475835 RTN4Q9NQC3 1192 aaKnown RBP6.07□□□□□ -1.44
LSM2-211ENST00000475835 CENPBP07199 599 aaPredicted RBP6.05□□□□□ -1.44
LSM2-211ENST00000475835 EHMT2Q96KQ7 1210 aa6.04□□□□□ -1.44
LSM2-211ENST00000475835 HOMEZQ8IX15 550 aa6.03□□□□□ -1.44
LSM2-211ENST00000475835 HRCP23327 699 aa6.01□□□□□ -1.45
LSM2-211ENST00000475835 UBE2Q2Q8WVN8 375 aa6□□□□□ -1.45
LSM2-211ENST00000475835 PLPPR3Q6T4P5 718 aa5.99□□□□□ -1.45
LSM2-211ENST00000475835 SCAF1Q9H7N4 1312 aaKnown RBP5.95□□□□□ -1.46
LSM2-211ENST00000475835 TIMELESSQ9UNS1 1208 aa5.94□□□□□ -1.46
LSM2-211ENST00000475835 PODXL2Q9NZ53 605 aa5.92□□□□□ -1.46
LSM2-211ENST00000475835 KLHL34Q8N239 644 aa5.91□□□□□ -1.46
LSM2-211ENST00000475835 TULP1O00294 542 aaPredicted RBP5.87□□□□□ -1.47
LSM2-211ENST00000475835 PLEKHG5O94827 1062 aa5.87□□□□□ -1.47
LSM2-211ENST00000475835 NEFLP07196 543 aa5.85□□□□□ -1.47
LSM2-211ENST00000475835 FBXO3Q9UK99 471 aa5.85□□□□□ -1.47
LSM2-211ENST00000475835 ANP32EQ9BTT0 268 aa5.84□□□□□ -1.47
LSM2-211ENST00000475835 PKNOX2Q96KN3 472 aa5.82□□□□□ -1.48
LSM2-211ENST00000475835 PDIA4P13667 645 aaKnown RBP5.81□□□□□ -1.48
LSM2-211ENST00000475835 TAOK2Q9UL54 1235 aa5.81□□□□□ -1.48
LSM2-211ENST00000475835 NPM2Q86SE8 214 aaKnown RBP5.79□□□□□ -1.48
LSM2-211ENST00000475835 BCANQ96GW7 911 aa5.79□□□□□ -1.48
LSM2-211ENST00000475835 ERICH6BQ5W0A0 696 aa5.78□□□□□ -1.48
LSM2-211ENST00000475835 DCAF8L2P0C7V8 631 aa5.75□□□□□ -1.49
LSM2-211ENST00000475835 MYT1LQ9UL68 1186 aa5.75□□□□□ -1.49
LSM2-211ENST00000475835 GTF3C3Q9Y5Q9 886 aa5.74□□□□□ -1.49
LSM2-211ENST00000475835 PDE4CQ08493 712 aa5.73□□□□□ -1.49
LSM2-211ENST00000475835 TAF7LQ5H9L4 462 aa5.73□□□□□ -1.49
LSM2-211ENST00000475835 KCNA4P22459 653 aa5.71□□□□□ -1.5
LSM2-211ENST00000475835 CDK11AQ9UQ88 783 aaPredicted RBP5.7□□□□□ -1.5
LSM2-211ENST00000475835 ACIN1Q9UKV3 1341 aaKnown RBP5.7□□□□□ -1.5
LSM2-211ENST00000475835 BRD2P25440 801 aaKnown RBP5.69□□□□□ -1.5
LSM2-211ENST00000475835 C14orf37Q86TY3 774 aa5.68□□□□□ -1.5
LSM2-211ENST00000475835 TPRNQ4KMQ1 711 aa5.67□□□□□ -1.5
LSM2-211ENST00000475835 ZNF326Q5BKZ1 582 aaKnown RBP5.67□□□□□ -1.5
LSM2-211ENST00000475835 ZEB1P37275 1124 aaPredicted RBP5.66□□□□□ -1.5
LSM2-211ENST00000475835 CLSPNQ9HAW4 1339 aa5.65□□□□□ -1.51
LSM2-211ENST00000475835 DCAF1Q9Y4B6 1507 aa5.64□□□□□ -1.51
LSM2-211ENST00000475835 HMGB1P09429 215 aaKnown RBP5.63□□□□□ -1.51
LSM2-211ENST00000475835 FGD1P98174 961 aa5.63□□□□□ -1.51
LSM2-211ENST00000475835 CHIC1Q5VXU3 224 aa5.63□□□□□ -1.51
LSM2-211ENST00000475835 CSRNP3Q8WYN3 585 aa5.63□□□□□ -1.51
LSM2-211ENST00000475835 CNKSR2Q8WXI2 1034 aa5.62□□□□□ -1.51
LSM2-211ENST00000475835 ANO8Q9HCE9 1232 aaPredicted RBP5.62□□□□□ -1.51
LSM2-211ENST00000475835 SHROOM4Q9ULL8 1493 aa5.62□□□□□ -1.51
LSM2-211ENST00000475835 CCDC180Q9P1Z9 1646 aa5.62□□□□□ -1.51
LSM2-211ENST00000475835 GLIPR1L2Q4G1C9 344 aa5.61□□□□□ -1.51
LSM2-211ENST00000475835 HSP90B1P14625 803 aaKnown RBP5.6□□□□□ -1.51
LSM2-211ENST00000475835 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
LSM2-211ENST00000475835 RSPH4AQ5TD94 716 aa5.58□□□□□ -1.52
LSM2-211ENST00000475835 LOC105371045A0A1W2PR82 267 aa5.57□□□□□ -1.52
LSM2-211ENST00000475835 TMEM132AQ24JP5 1023 aa5.57□□□□□ -1.52
LSM2-211ENST00000475835 CHMP4AQ9BY43 222 aa5.57□□□□□ -1.52
LSM2-211ENST00000475835 RSPH6AQ9H0K4 717 aa5.55□□□□□ -1.52
LSM2-211ENST00000475835 BCCIPQ9P287 314 aaKnown RBP eCLIP5.55□□□□□ -1.52
LSM2-211ENST00000475835 SAMD1Q6SPF0 538 aaPredicted RBP5.54□□□□□ -1.52
LSM2-211ENST00000475835 PLCB2Q00722 1185 aa5.53□□□□□ -1.52
LSM2-211ENST00000475835 AAMPQ13685 434 aa5.53□□□□□ -1.52
LSM2-211ENST00000475835 BCL11BQ9C0K0 894 aaPredicted RBP5.52□□□□□ -1.53
LSM2-211ENST00000475835 TRIM26Q12899 539 aaPredicted RBP5.51□□□□□ -1.53
LSM2-211ENST00000475835 ZCCHC6Q5VYS8 1495 aaKnown RBP5.51□□□□□ -1.53
LSM2-211ENST00000475835 HAP1P54257 671 aaPredicted RBP5.5□□□□□ -1.53
LSM2-211ENST00000475835 NEUROD1Q13562 356 aa5.5□□□□□ -1.53
LSM2-211ENST00000475835 ARID3AQ99856 593 aa5.5□□□□□ -1.53
LSM2-211ENST00000475835 PPARGC1BQ86YN6 1023 aaKnown RBP5.48□□□□□ -1.53
LSM2-211ENST00000475835 SALL2Q9Y467 1007 aaPredicted RBP5.48□□□□□ -1.53
LSM2-211ENST00000475835 SUPT5HO00267 1087 aaKnown RBP5.47□□□□□ -1.53
LSM2-211ENST00000475835 NAP1L5Q96NT1 182 aaPredicted RBP5.47□□□□□ -1.53
LSM2-211ENST00000475835 VSIG10Q8N0Z9 540 aa5.45□□□□□ -1.54
LSM2-211ENST00000475835 DHX37Q8IY37 1157 aaKnown RBP5.44□□□□□ -1.54
LSM2-211ENST00000475835 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
LSM2-211ENST00000475835 PUS7Q96PZ0 661 aaKnown RBP5.42□□□□□ -1.54
LSM2-211ENST00000475835 MYO15BQ96JP2 1530 aa5.4□□□□□ -1.54
LSM2-211ENST00000475835 CLSTN1O94985 981 aa5.4□□□□□ -1.54
LSM2-211ENST00000475835 YTHDC1Q96MU7 727 aaKnown RBP5.4□□□□□ -1.54
LSM2-211ENST00000475835 CCDC9Q9Y3X0 531 aaKnown RBP5.4□□□□□ -1.54
LSM2-211ENST00000475835 AEBP2Q6ZN18 517 aaPredicted RBP5.39□□□□□ -1.55
LSM2-211ENST00000475835 ZMYND15Q9H091 742 aa5.39□□□□□ -1.55
LSM2-211ENST00000475835 A0A0U1RQG5 324 aaPredicted RBP5.38□□□□□ -1.55
LSM2-211ENST00000475835 CCDC136Q96JN2 1154 aa5.38□□□□□ -1.55
LSM2-211ENST00000475835 TICAM2Q86XR7 235 aa5.37□□□□□ -1.55
LSM2-211ENST00000475835 DEKP35659 375 aaKnown RBP5.36□□□□□ -1.55
LSM2-211ENST00000475835 TEX2Q8IWB9 1127 aa5.36□□□□□ -1.55
LSM2-211ENST00000475835 POLR3GLQ9BT43 218 aa5.36□□□□□ -1.55
LSM2-211ENST00000475835 TSHZ2Q9NRE2 1034 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms