RNA–Protein interactions for RNA: ENST00000520964.1

RTL8A-203, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 3

Gene RTL8A, Length 817 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-203ENST00000520964 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
RTL8A-203ENST00000520964 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
RTL8A-203ENST00000520964 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
RTL8A-203ENST00000520964 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
RTL8A-203ENST00000520964 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
RTL8A-203ENST00000520964 ABCC9O60706 1549 aa18.69■□□□□ 0.58
RTL8A-203ENST00000520964 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
RTL8A-203ENST00000520964 NACADO15069 1562 aa18.53■□□□□ 0.56
RTL8A-203ENST00000520964 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
RTL8A-203ENST00000520964 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
RTL8A-203ENST00000520964 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
RTL8A-203ENST00000520964 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
RTL8A-203ENST00000520964 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
RTL8A-203ENST00000520964 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
RTL8A-203ENST00000520964 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
RTL8A-203ENST00000520964 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
RTL8A-203ENST00000520964 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
RTL8A-203ENST00000520964 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
RTL8A-203ENST00000520964 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
RTL8A-203ENST00000520964 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
RTL8A-203ENST00000520964 WIZO95785 1651 aa17.36■□□□□ 0.37
RTL8A-203ENST00000520964 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
RTL8A-203ENST00000520964 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
RTL8A-203ENST00000520964 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
RTL8A-203ENST00000520964 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
RTL8A-203ENST00000520964 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
RTL8A-203ENST00000520964 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
RTL8A-203ENST00000520964 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
RTL8A-203ENST00000520964 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
RTL8A-203ENST00000520964 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
RTL8A-203ENST00000520964 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
RTL8A-203ENST00000520964 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
RTL8A-203ENST00000520964 CFTRP13569 1480 aa16.69■□□□□ 0.26
RTL8A-203ENST00000520964 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
RTL8A-203ENST00000520964 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
RTL8A-203ENST00000520964 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
RTL8A-203ENST00000520964 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
RTL8A-203ENST00000520964 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
RTL8A-203ENST00000520964 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
RTL8A-203ENST00000520964 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
RTL8A-203ENST00000520964 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
RTL8A-203ENST00000520964 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
RTL8A-203ENST00000520964 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
RTL8A-203ENST00000520964 NESP48681 1621 aa16.41■□□□□ 0.22
RTL8A-203ENST00000520964 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
RTL8A-203ENST00000520964 CUX1P39880 1505 aa16.4■□□□□ 0.22
RTL8A-203ENST00000520964 EEA1Q15075 1411 aa16.36■□□□□ 0.21
RTL8A-203ENST00000520964 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
RTL8A-203ENST00000520964 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
RTL8A-203ENST00000520964 SOGA1O94964 1423 aa16.29■□□□□ 0.2
RTL8A-203ENST00000520964 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
RTL8A-203ENST00000520964 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
RTL8A-203ENST00000520964 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
RTL8A-203ENST00000520964 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
RTL8A-203ENST00000520964 LOC105371045A0A1W2PR82 267 aa16.23■□□□□ 0.19
RTL8A-203ENST00000520964 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
RTL8A-203ENST00000520964 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.19
RTL8A-203ENST00000520964 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
RTL8A-203ENST00000520964 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
RTL8A-203ENST00000520964 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
RTL8A-203ENST00000520964 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
RTL8A-203ENST00000520964 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
RTL8A-203ENST00000520964 KIF21BO75037 1637 aa16.13■□□□□ 0.17
RTL8A-203ENST00000520964 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
RTL8A-203ENST00000520964 WDR62O43379 1518 aa16.09■□□□□ 0.17
RTL8A-203ENST00000520964 CUX2O14529 1486 aa16.08■□□□□ 0.16
RTL8A-203ENST00000520964 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
RTL8A-203ENST00000520964 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
RTL8A-203ENST00000520964 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
RTL8A-203ENST00000520964 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
RTL8A-203ENST00000520964 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
RTL8A-203ENST00000520964 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
RTL8A-203ENST00000520964 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
RTL8A-203ENST00000520964 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
RTL8A-203ENST00000520964 IGF1RP08069 1367 aa16.02■□□□□ 0.16
RTL8A-203ENST00000520964 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
RTL8A-203ENST00000520964 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
RTL8A-203ENST00000520964 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
RTL8A-203ENST00000520964 IFT140Q96RY7 1462 aa15.96■□□□□ 0.14
RTL8A-203ENST00000520964 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
RTL8A-203ENST00000520964 CUL7Q14999 1698 aa15.92■□□□□ 0.14
RTL8A-203ENST00000520964 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
RTL8A-203ENST00000520964 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
RTL8A-203ENST00000520964 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
RTL8A-203ENST00000520964 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
RTL8A-203ENST00000520964 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
RTL8A-203ENST00000520964 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
RTL8A-203ENST00000520964 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
RTL8A-203ENST00000520964 AQRO60306 1485 aaKnown RBP eCLIP15.81■□□□□ 0.122e-9■■■■■ 56.7
RTL8A-203ENST00000520964 ZNF608Q9ULD9 1512 aaPredicted RBP15.81■□□□□ 0.12
RTL8A-203ENST00000520964 CLIP1P30622 1438 aa15.79■□□□□ 0.12
RTL8A-203ENST00000520964 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
RTL8A-203ENST00000520964 ADAMTS12P58397 1594 aa15.77■□□□□ 0.11
RTL8A-203ENST00000520964 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
RTL8A-203ENST00000520964 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
RTL8A-203ENST00000520964 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
RTL8A-203ENST00000520964 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
RTL8A-203ENST00000520964 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
RTL8A-203ENST00000520964 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
RTL8A-203ENST00000520964 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms