Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-6A0A0B4J262 AC020907.5-201ENST00000624372 1936 ntBASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 OR6D1P-202ENST00000641007 5290 ntBASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
TRAV8-6A0A0B4J262 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 KRT18P14-201ENST00000534205 1250 ntBASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 AC120498.10-201ENST00000621827 505 ntBASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-6A0A0B4J262 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV8-6A0A0B4J262 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 TERF1P2-201ENST00000583350 1212 ntBASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 AC008175.2-201ENST00000612840 297 ntBASIC14.52□□□□□ -0.09
TRAV8-6A0A0B4J262 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms