RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
VPS37A-201ENST00000324849 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
VPS37A-201ENST00000324849 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
VPS37A-201ENST00000324849 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
VPS37A-201ENST00000324849 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
VPS37A-201ENST00000324849 APLP2Q06481 763 aa27.8■■■□□ 2.04
VPS37A-201ENST00000324849 FAM9AQ8IZU1 332 aaPredicted RBP27.72■■■□□ 2.03
VPS37A-201ENST00000324849 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
VPS37A-201ENST00000324849 TTBK1Q5TCY1 1321 aaPredicted RBP26.94■■□□□ 1.9
VPS37A-201ENST00000324849 RANGAP1P46060 587 aaPredicted RBP26.89■■□□□ 1.89
VPS37A-201ENST00000324849 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.89
VPS37A-201ENST00000324849 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
VPS37A-201ENST00000324849 PCGF6Q9BYE7 350 aa26.68■■□□□ 1.86
VPS37A-201ENST00000324849 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
VPS37A-201ENST00000324849 CCER1Q8TC90 406 aaPredicted RBP26.4■■□□□ 1.82
VPS37A-201ENST00000324849 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
VPS37A-201ENST00000324849 CENPBP07199 599 aaPredicted RBP26.25■■□□□ 1.79
VPS37A-201ENST00000324849 ERICH6Q7L0X2 663 aa26.1■■□□□ 1.77
VPS37A-201ENST00000324849 MYT1LQ9UL68 1186 aa26.06■■□□□ 1.76
VPS37A-201ENST00000324849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
VPS37A-201ENST00000324849 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
VPS37A-201ENST00000324849 NEFLP07196 543 aa25.93■■□□□ 1.74
VPS37A-201ENST00000324849 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
VPS37A-201ENST00000324849 ITGAEP38570 1179 aa25.7■■□□□ 1.7
VPS37A-201ENST00000324849 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
VPS37A-201ENST00000324849 POLR3GLQ9BT43 218 aa25.58■■□□□ 1.69
VPS37A-201ENST00000324849 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
VPS37A-201ENST00000324849 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
VPS37A-201ENST00000324849 SLC4A1APQ9BWU0 796 aaKnown RBP25.27■■□□□ 1.64
VPS37A-201ENST00000324849 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
VPS37A-201ENST00000324849 DAXXQ9UER7 740 aaPredicted RBP25.25■■□□□ 1.63
VPS37A-201ENST00000324849 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
VPS37A-201ENST00000324849 CNGB1Q14028 1251 aaPredicted RBP25.21■■□□□ 1.63
VPS37A-201ENST00000324849 ABCC9O60706 1549 aa25.18■■□□□ 1.62
VPS37A-201ENST00000324849 FAM50AQ14320 339 aaKnown RBP25.07■■□□□ 1.6
VPS37A-201ENST00000324849 HRCP23327 699 aa25.04■■□□□ 1.6
VPS37A-201ENST00000324849 TRIM52Q96A61 297 aa25.01■■□□□ 1.59
VPS37A-201ENST00000324849 FBLN2P98095 1184 aa25.01■■□□□ 1.59
VPS37A-201ENST00000324849 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
VPS37A-201ENST00000324849 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
VPS37A-201ENST00000324849 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
VPS37A-201ENST00000324849 MYT1Q01538 1121 aa24.68■■□□□ 1.54
VPS37A-201ENST00000324849 BCANQ96GW7 911 aa24.61■■□□□ 1.53
VPS37A-201ENST00000324849 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
VPS37A-201ENST00000324849 DIEXFQ68CQ4 756 aaKnown RBP24.57■■□□□ 1.52
VPS37A-201ENST00000324849 ZBTB47Q9UFB7 747 aaPredicted RBP24.54■■□□□ 1.52
VPS37A-201ENST00000324849 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
VPS37A-201ENST00000324849 NEFMP07197 916 aa24.49■■□□□ 1.51
VPS37A-201ENST00000324849 P3H3Q8IVL6 736 aa24.49■■□□□ 1.51
VPS37A-201ENST00000324849 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
VPS37A-201ENST00000324849 ARID3CA6NKF2 412 aa24.47■■□□□ 1.51
VPS37A-201ENST00000324849 ANP32CO43423 234 aa24.45■■□□□ 1.5
VPS37A-201ENST00000324849 SLC24A1O60721 1099 aa24.44■■□□□ 1.5
VPS37A-201ENST00000324849 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
VPS37A-201ENST00000324849 ZNF777Q9ULD5 760 aaPredicted RBP24.42■■□□□ 1.5
VPS37A-201ENST00000324849 RTL5Q5HYW3 569 aaPredicted RBP24.41■■□□□ 1.5
VPS37A-201ENST00000324849 NPM1P06748 294 aaKnown RBP eCLIP24.38■■□□□ 1.49
VPS37A-201ENST00000324849 CANXP27824 592 aaKnown RBP24.27■■□□□ 1.48
VPS37A-201ENST00000324849 STAG3Q9UJ98 1225 aa24.24■■□□□ 1.47
VPS37A-201ENST00000324849 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
VPS37A-201ENST00000324849 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
VPS37A-201ENST00000324849 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
VPS37A-201ENST00000324849 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
VPS37A-201ENST00000324849 TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
VPS37A-201ENST00000324849 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
VPS37A-201ENST00000324849 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
VPS37A-201ENST00000324849 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.42
VPS37A-201ENST00000324849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.413e-6■■□□□ 13.8
VPS37A-201ENST00000324849 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
VPS37A-201ENST00000324849 CHIC2Q9UKJ5 165 aa23.79■■□□□ 1.4
VPS37A-201ENST00000324849 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.39
VPS37A-201ENST00000324849 ANP32AP39687 249 aaKnown RBP23.68■■□□□ 1.38
VPS37A-201ENST00000324849 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
VPS37A-201ENST00000324849 TMC1Q8TDI8 760 aa23.62■■□□□ 1.37
VPS37A-201ENST00000324849 KDM2AQ9Y2K7 1162 aa23.61■■□□□ 1.37
VPS37A-201ENST00000324849 HSP90AA1P07900 732 aaKnown RBP23.6■■□□□ 1.37
VPS37A-201ENST00000324849 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
VPS37A-201ENST00000324849 HNRNPUQ00839 825 aaKnown RBP eCLIP23.59■■□□□ 1.37
VPS37A-201ENST00000324849 UPF2Q9HAU5 1272 aaKnown RBP23.59■■□□□ 1.37
VPS37A-201ENST00000324849 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
VPS37A-201ENST00000324849 PLEKHD1A6NEE1 506 aa23.58■■□□□ 1.37
VPS37A-201ENST00000324849 DDX10Q13206 875 aaKnown RBP23.58■■□□□ 1.37
VPS37A-201ENST00000324849 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
VPS37A-201ENST00000324849 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
VPS37A-201ENST00000324849 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
VPS37A-201ENST00000324849 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
VPS37A-201ENST00000324849 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.54■■□□□ 1.36
VPS37A-201ENST00000324849 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
VPS37A-201ENST00000324849 A0A0G2JS52 829 aa23.52■■□□□ 1.36
VPS37A-201ENST00000324849 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
VPS37A-201ENST00000324849 ANP32BQ92688 251 aaKnown RBP23.46■■□□□ 1.35
VPS37A-201ENST00000324849 ARID4BQ4LE39 1312 aaPredicted RBP23.43■■□□□ 1.34
VPS37A-201ENST00000324849 ACIN1Q9UKV3 1341 aaKnown RBP23.42■■□□□ 1.34
VPS37A-201ENST00000324849 FKBP8Q14318 412 aa23.4■■□□□ 1.34
VPS37A-201ENST00000324849 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
VPS37A-201ENST00000324849 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
VPS37A-201ENST00000324849 RRP7BPQ9NSQ0 103 aa23.38■■□□□ 1.33
VPS37A-201ENST00000324849 CLIP1P30622 1438 aa23.38■■□□□ 1.33
VPS37A-201ENST00000324849 ZBTB7CA1YPR0 619 aa23.37■■□□□ 1.33
VPS37A-201ENST00000324849 PLEKHG5O94827 1062 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms