Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 BX276092.2-201ENST00000417668 665 ntBASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 C2orf69P4-201ENST00000565394 541 ntBASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 AL050303.2-201ENST00000619798 666 ntBASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 BX119927.1-201ENST00000636596 1552 ntBASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 HLA-G-202ENST00000376815 851 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 HLA-G-203ENST00000376818 1127 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 CROCCP5-201ENST00000436658 830 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 AL121832.2-201ENST00000610979 668 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 KRT8P20-201ENST00000423953 1409 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 KRT16P6-202ENST00000425692 1426 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 HTR7P1-202ENST00000624664 4411 ntBASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRGV1A0A0A0MS02 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 KRT8P17-201ENST00000453110 1448 ntBASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 SLC29A4P1-201ENST00000398760 971 ntBASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 RAP2CP1-201ENST00000605103 478 ntBASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 AL031963.3-201ENST00000606441 850 ntBASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV1A0A0A0MS02 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms