RNA–Protein interactions for RNA: ENST00000382862.7

MSLN-201, Transcript of mesothelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MSLN, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-201ENST00000382862 NISCHQ9Y2I1 1504 aa45.78■■■■■ 4.92
MSLN-201ENST00000382862 CCDC180Q9P1Z9 1646 aa39.91■■■■□ 3.98
MSLN-201ENST00000382862 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
MSLN-201ENST00000382862 ABCC9O60706 1549 aa37.95■■■■□ 3.67
MSLN-201ENST00000382862 DCAF8L2P0C7V8 631 aa37.87■■■■□ 3.65
MSLN-201ENST00000382862 DCAF1Q9Y4B6 1507 aa37.75■■■■□ 3.63
MSLN-201ENST00000382862 SHROOM4Q9ULL8 1493 aa37.45■■■■□ 3.59
MSLN-201ENST00000382862 MYO15BQ96JP2 1530 aa37.3■■■■□ 3.56
MSLN-201ENST00000382862 NACADO15069 1562 aa37.15■■■■□ 3.54
MSLN-201ENST00000382862 RB1CC1Q8TDY2 1594 aa36.88■■■■□ 3.49
MSLN-201ENST00000382862 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
MSLN-201ENST00000382862 UNC13AQ9UPW8 1703 aa36.36■■■■□ 3.41
MSLN-201ENST00000382862 BICRAQ9NZM4 1560 aa35.92■■■■□ 3.34
MSLN-201ENST00000382862 SUPT5HO00267 1087 aaKnown RBP35.91■■■■□ 3.34
MSLN-201ENST00000382862 PABPN1Q86U42 306 aaKnown RBP eCLIP35.79■■■■□ 3.32
MSLN-201ENST00000382862 CECR2Q9BXF3 1484 aa35.7■■■■□ 3.31
MSLN-201ENST00000382862 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
MSLN-201ENST00000382862 MROH2BQ7Z745 1585 aa35.46■■■■□ 3.27
MSLN-201ENST00000382862 BAZ1AQ9NRL2 1556 aaPredicted RBP35.31■■■■□ 3.24
MSLN-201ENST00000382862 SMARCA4P51532 1647 aa35.25■■■■□ 3.23
MSLN-201ENST00000382862 WIZO95785 1651 aa35.2■■■■□ 3.23
MSLN-201ENST00000382862 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
MSLN-201ENST00000382862 PEG3Q9GZU2 1588 aa34.76■■■■□ 3.15
MSLN-201ENST00000382862 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
MSLN-201ENST00000382862 ATAD2BQ9ULI0 1458 aa34.66■■■■□ 3.14
MSLN-201ENST00000382862 SMARCA2P51531 1590 aa34.56■■■■□ 3.12
MSLN-201ENST00000382862 BAZ1BQ9UIG0 1483 aaKnown RBP34.44■■■■□ 3.1
MSLN-201ENST00000382862 CCDC88BA6NC98 1476 aa34.4■■■■□ 3.1
MSLN-201ENST00000382862 CC2D2AQ9P2K1 1620 aa34.32■■■■□ 3.09
MSLN-201ENST00000382862 NCAPD3P42695 1498 aa34.31■■■■□ 3.08
MSLN-201ENST00000382862 CHIC1Q5VXU3 224 aa34.31■■■■□ 3.08
MSLN-201ENST00000382862 HMGXB3Q12766 1538 aa34.27■■■■□ 3.08
MSLN-201ENST00000382862 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
MSLN-201ENST00000382862 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
MSLN-201ENST00000382862 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
MSLN-201ENST00000382862 CFTRP13569 1480 aa33.57■■■□□ 2.96
MSLN-201ENST00000382862 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
MSLN-201ENST00000382862 PRDM2Q13029 1718 aa33.43■■■□□ 2.94
MSLN-201ENST00000382862 WRNQ14191 1432 aaPredicted RBP eCLIP33.39■■■□□ 2.94
MSLN-201ENST00000382862 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
MSLN-201ENST00000382862 NESP48681 1621 aa33.35■■■□□ 2.93
MSLN-201ENST00000382862 FAM9AQ8IZU1 332 aaPredicted RBP33.19■■■□□ 2.9
MSLN-201ENST00000382862 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
MSLN-201ENST00000382862 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
MSLN-201ENST00000382862 CUX1P39880 1505 aa33.15■■■□□ 2.9
MSLN-201ENST00000382862 BIVM-ERCC5R4GMW8 1640 aa33.13■■■□□ 2.89
MSLN-201ENST00000382862 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
MSLN-201ENST00000382862 LOC105371045A0A1W2PR82 267 aa33.08■■■□□ 2.89
MSLN-201ENST00000382862 SOGA1O94964 1423 aa33.05■■■□□ 2.88
MSLN-201ENST00000382862 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
MSLN-201ENST00000382862 KIF21AQ7Z4S6 1674 aa32.94■■■□□ 2.86
MSLN-201ENST00000382862 CEP164Q9UPV0 1460 aa32.89■■■□□ 2.86
MSLN-201ENST00000382862 PDS5BQ9NTI5 1447 aa32.86■■■□□ 2.85
MSLN-201ENST00000382862 EHMT2Q96KQ7 1210 aa32.83■■■□□ 2.85
MSLN-201ENST00000382862 DNMBPQ6XZF7 1577 aa32.8■■■□□ 2.84
MSLN-201ENST00000382862 URB2Q14146 1524 aaKnown RBP32.78■■■□□ 2.84
MSLN-201ENST00000382862 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
MSLN-201ENST00000382862 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.84
MSLN-201ENST00000382862 EEA1Q15075 1411 aa32.73■■■□□ 2.83
MSLN-201ENST00000382862 CSRNP3Q8WYN3 585 aa32.66■■■□□ 2.82
MSLN-201ENST00000382862 POLA1P09884 1462 aaPredicted RBP32.62■■■□□ 2.81
MSLN-201ENST00000382862 RAD54L2Q9Y4B4 1467 aa32.57■■■□□ 2.8
MSLN-201ENST00000382862 CUX2O14529 1486 aa32.52■■■□□ 2.8
MSLN-201ENST00000382862 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.8
MSLN-201ENST00000382862 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
MSLN-201ENST00000382862 KIF21BO75037 1637 aa32.45■■■□□ 2.79
MSLN-201ENST00000382862 ERCC6Q03468 1493 aa32.45■■■□□ 2.78
MSLN-201ENST00000382862 WDR97A6NE52 1622 aa32.42■■■□□ 2.78
MSLN-201ENST00000382862 ABCA10Q8WWZ4 1543 aa32.42■■■□□ 2.78
MSLN-201ENST00000382862 GOLGA3Q08378 1498 aa32.39■■■□□ 2.78
MSLN-201ENST00000382862 WDR62O43379 1518 aa32.38■■■□□ 2.77
MSLN-201ENST00000382862 RAPGEF2Q9Y4G8 1499 aa32.37■■■□□ 2.77
MSLN-201ENST00000382862 THOC2Q8NI27 1593 aaKnown RBP32.37■■■□□ 2.77
MSLN-201ENST00000382862 PRXQ9BXM0 1461 aa32.33■■■□□ 2.77
MSLN-201ENST00000382862 TARBP1Q13395 1621 aaKnown RBP32.32■■■□□ 2.76
MSLN-201ENST00000382862 IGF1RP08069 1367 aa32.29■■■□□ 2.76
MSLN-201ENST00000382862 TNIKQ9UKE5 1360 aa32.25■■■□□ 2.75
MSLN-201ENST00000382862 UBTFP17480 764 aaKnown RBP32.25■■■□□ 2.75
MSLN-201ENST00000382862 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
MSLN-201ENST00000382862 TDRD9Q8NDG6 1382 aaKnown RBP32.22■■■□□ 2.75
MSLN-201ENST00000382862 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
MSLN-201ENST00000382862 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
MSLN-201ENST00000382862 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
MSLN-201ENST00000382862 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
MSLN-201ENST00000382862 IFT140Q96RY7 1462 aa32.07■■■□□ 2.72
MSLN-201ENST00000382862 ZNF608Q9ULD9 1512 aaPredicted RBP32.06■■■□□ 2.72
MSLN-201ENST00000382862 AQRO60306 1485 aaKnown RBP eCLIP32.05■■■□□ 2.72
MSLN-201ENST00000382862 PBRM1Q86U86 1689 aa32.01■■■□□ 2.72
MSLN-201ENST00000382862 CUL7Q14999 1698 aa32.01■■■□□ 2.71
MSLN-201ENST00000382862 EIF4G3O43432 1585 aaKnown RBP31.92■■■□□ 2.7
MSLN-201ENST00000382862 RANGAP1P46060 587 aaPredicted RBP31.9■■■□□ 2.7
MSLN-201ENST00000382862 CLIP1P30622 1438 aa31.89■■■□□ 2.7
MSLN-201ENST00000382862 GRIN2BQ13224 1484 aa31.83■■■□□ 2.69
MSLN-201ENST00000382862 ADAMTS12P58397 1594 aa31.8■■■□□ 2.68
MSLN-201ENST00000382862 CTTNBP2Q8WZ74 1663 aa31.72■■■□□ 2.67
MSLN-201ENST00000382862 SNAPC4Q5SXM2 1469 aa31.72■■■□□ 2.67
MSLN-201ENST00000382862 FHAD1B1AJZ9 1412 aa31.71■■■□□ 2.67
MSLN-201ENST00000382862 ARAP1Q96P48 1450 aa31.67■■■□□ 2.66
MSLN-201ENST00000382862 ARHGAP35Q9NRY4 1499 aa31.66■■■□□ 2.66
MSLN-201ENST00000382862 PPARGC1BQ86YN6 1023 aaKnown RBP31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 800.5 ms