Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB2O43679 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB2O43679 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB2O43679 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 AP001271.2-201ENST00000624018 1556 ntBASIC19.87■□□□□ 0.77
LDB2O43679 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB2O43679 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LDB2O43679 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB2O43679 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.87■□□□□ 0.77
LDB2O43679 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.87■□□□□ 0.77
LDB2O43679 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB2O43679 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.87■□□□□ 0.77
LDB2O43679 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LDB2O43679 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LDB2O43679 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.87■□□□□ 0.77
LDB2O43679 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB2O43679 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.86■□□□□ 0.77
LDB2O43679 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.86■□□□□ 0.77
LDB2O43679 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.86■□□□□ 0.77
LDB2O43679 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.86■□□□□ 0.77
LDB2O43679 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.86■□□□□ 0.77
LDB2O43679 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB2O43679 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.86■□□□□ 0.77
LDB2O43679 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB2O43679 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LDB2O43679 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.85■□□□□ 0.77
LDB2O43679 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LDB2O43679 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.85■□□□□ 0.77
LDB2O43679 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB2O43679 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB2O43679 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDB2O43679 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB2O43679 AC116351.2-201ENST00000606540 1585 ntBASIC19.84■□□□□ 0.77
LDB2O43679 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
LDB2O43679 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.84■□□□□ 0.77
LDB2O43679 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.84■□□□□ 0.77
LDB2O43679 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDB2O43679 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.84■□□□□ 0.77
LDB2O43679 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDB2O43679 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB2O43679 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.84■□□□□ 0.77
LDB2O43679 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.83■□□□□ 0.77
LDB2O43679 AL158211.5-201ENST00000623583 2518 ntBASIC19.83■□□□□ 0.77
LDB2O43679 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB2O43679 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB2O43679 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB2O43679 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB2O43679 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LDB2O43679 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.83■□□□□ 0.77
LDB2O43679 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB2O43679 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB2O43679 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LDB2O43679 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.83■□□□□ 0.77
LDB2O43679 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LDB2O43679 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms