Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 SMG8-203ENST00000578922 2178 ntBASIC17.4■□□□□ 0.38
CDH20Q9HBT6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 KRT8P20-201ENST00000423953 1409 ntBASIC17.4■□□□□ 0.38
CDH20Q9HBT6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 AC023632.3-201ENST00000521633 145 ntBASIC17.4■□□□□ 0.38
CDH20Q9HBT6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 AL031963.3-201ENST00000606441 850 ntBASIC17.4■□□□□ 0.38
CDH20Q9HBT6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH20Q9HBT6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.39■□□□□ 0.38
CDH20Q9HBT6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH20Q9HBT6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 PNMA6B-201ENST00000538162 1200 ntBASIC17.39■□□□□ 0.37
CDH20Q9HBT6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH20Q9HBT6 LINC01006-201ENST00000333319 2292 ntBASIC17.38■□□□□ 0.37
CDH20Q9HBT6 KRT8P17-201ENST00000453110 1448 ntBASIC17.38■□□□□ 0.37
CDH20Q9HBT6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 AL157384.1-201ENST00000445995 2473 ntBASIC17.38■□□□□ 0.37
CDH20Q9HBT6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH20Q9HBT6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms