Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.65■□□□□ 0.9
HAPLN3Q96S86 AC120498.8-201ENST00000614275 531 ntBASIC20.65■□□□□ 0.9
HAPLN3Q96S86 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HAPLN3Q96S86 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
HAPLN3Q96S86 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HAPLN3Q96S86 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.64■□□□□ 0.9
HAPLN3Q96S86 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HAPLN3Q96S86 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HAPLN3Q96S86 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 AC008687.6-201ENST00000596318 630 ntBASIC20.64■□□□□ 0.89
HAPLN3Q96S86 AC008403.3-201ENST00000598924 454 ntBASIC20.64■□□□□ 0.89
HAPLN3Q96S86 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HAPLN3Q96S86 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 AC026366.1-201ENST00000488803 879 ntBASIC20.63■□□□□ 0.89
HAPLN3Q96S86 AP003097.1-201ENST00000530657 1135 ntBASIC20.63■□□□□ 0.89
HAPLN3Q96S86 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.63■□□□□ 0.89
HAPLN3Q96S86 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HAPLN3Q96S86 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HAPLN3Q96S86 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HAPLN3Q96S86 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms