RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 NISCHQ9Y2I1 1504 aa45.71■■■■■ 4.91
RGMA-208ENST00000556658 CCDC180Q9P1Z9 1646 aa40.06■■■■■ 4
RGMA-208ENST00000556658 ZCCHC6Q5VYS8 1495 aaKnown RBP38.31■■■■□ 3.72
RGMA-208ENST00000556658 ABCC9O60706 1549 aa38.09■■■■□ 3.69
RGMA-208ENST00000556658 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
RGMA-208ENST00000556658 DCAF1Q9Y4B6 1507 aa37.82■■■■□ 3.65
RGMA-208ENST00000556658 MYO15BQ96JP2 1530 aa37.51■■■■□ 3.6
RGMA-208ENST00000556658 NACADO15069 1562 aa37.39■■■■□ 3.58
RGMA-208ENST00000556658 RB1CC1Q8TDY2 1594 aa37.15■■■■□ 3.54
RGMA-208ENST00000556658 SHROOM4Q9ULL8 1493 aa37.01■■■■□ 3.51
RGMA-208ENST00000556658 SCRIBQ14160 1630 aa36.73■■■■□ 3.47
RGMA-208ENST00000556658 UNC13AQ9UPW8 1703 aa36.34■■■■□ 3.41
RGMA-208ENST00000556658 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.34
RGMA-208ENST00000556658 PABPN1Q86U42 306 aaKnown RBP eCLIP35.85■■■■□ 3.33
RGMA-208ENST00000556658 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
RGMA-208ENST00000556658 CECR2Q9BXF3 1484 aa35.49■■■■□ 3.27
RGMA-208ENST00000556658 BAZ1AQ9NRL2 1556 aaPredicted RBP35.35■■■■□ 3.25
RGMA-208ENST00000556658 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
RGMA-208ENST00000556658 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.24
RGMA-208ENST00000556658 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
RGMA-208ENST00000556658 WIZO95785 1651 aa34.98■■■■□ 3.19
RGMA-208ENST00000556658 EIF4G1Q04637 1599 aaKnown RBP34.92■■■■□ 3.18
RGMA-208ENST00000556658 PEG3Q9GZU2 1588 aa34.8■■■■□ 3.16
RGMA-208ENST00000556658 SMARCA2P51531 1590 aa34.72■■■■□ 3.15
RGMA-208ENST00000556658 ATAD2BQ9ULI0 1458 aa34.7■■■■□ 3.15
RGMA-208ENST00000556658 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
RGMA-208ENST00000556658 BAZ1BQ9UIG0 1483 aaKnown RBP34.51■■■■□ 3.11
RGMA-208ENST00000556658 CC2D2AQ9P2K1 1620 aa34.49■■■■□ 3.11
RGMA-208ENST00000556658 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
RGMA-208ENST00000556658 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
RGMA-208ENST00000556658 CCDC88BA6NC98 1476 aa34.26■■■■□ 3.07
RGMA-208ENST00000556658 DNAJC5BQ9UF47 199 aa33.83■■■■□ 3.01
RGMA-208ENST00000556658 CHIC1Q5VXU3 224 aa33.8■■■■□ 3
RGMA-208ENST00000556658 CFTRP13569 1480 aa33.61■■■□□ 2.97
RGMA-208ENST00000556658 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
RGMA-208ENST00000556658 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
RGMA-208ENST00000556658 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
RGMA-208ENST00000556658 ABCC8Q09428 1581 aa33.4■■■□□ 2.94
RGMA-208ENST00000556658 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
RGMA-208ENST00000556658 NESP48681 1621 aa33.32■■■□□ 2.92
RGMA-208ENST00000556658 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
RGMA-208ENST00000556658 FANCD2Q9BXW9 1451 aa33.19■■■□□ 2.9
RGMA-208ENST00000556658 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
RGMA-208ENST00000556658 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
RGMA-208ENST00000556658 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
RGMA-208ENST00000556658 CEP164Q9UPV0 1460 aa33.03■■■□□ 2.88
RGMA-208ENST00000556658 BIVM-ERCC5R4GMW8 1640 aa33.03■■■□□ 2.88
RGMA-208ENST00000556658 CUX1P39880 1505 aa33■■■□□ 2.87
RGMA-208ENST00000556658 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
RGMA-208ENST00000556658 DNMBPQ6XZF7 1577 aa32.85■■■□□ 2.85
RGMA-208ENST00000556658 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
RGMA-208ENST00000556658 FAM9AQ8IZU1 332 aaPredicted RBP32.77■■■□□ 2.84
RGMA-208ENST00000556658 URB2Q14146 1524 aaKnown RBP32.76■■■□□ 2.83
RGMA-208ENST00000556658 ERCC6Q03468 1493 aa32.76■■■□□ 2.83
RGMA-208ENST00000556658 SOGA1O94964 1423 aa32.71■■■□□ 2.83
RGMA-208ENST00000556658 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
RGMA-208ENST00000556658 MRC2Q9UBG0 1479 aa32.7■■■□□ 2.83
RGMA-208ENST00000556658 EEA1Q15075 1411 aa32.68■■■□□ 2.82
RGMA-208ENST00000556658 POLA1P09884 1462 aaPredicted RBP32.6■■■□□ 2.81
RGMA-208ENST00000556658 RUSC2Q8N2Y8 1516 aa32.59■■■□□ 2.81
RGMA-208ENST00000556658 WDR62O43379 1518 aa32.53■■■□□ 2.8
RGMA-208ENST00000556658 CSRNP3Q8WYN3 585 aa32.52■■■□□ 2.8
RGMA-208ENST00000556658 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
RGMA-208ENST00000556658 LOC105371045A0A1W2PR82 267 aa32.48■■■□□ 2.79
RGMA-208ENST00000556658 THOC2Q8NI27 1593 aaKnown RBP32.48■■■□□ 2.79
RGMA-208ENST00000556658 RAD54L2Q9Y4B4 1467 aa32.47■■■□□ 2.79
RGMA-208ENST00000556658 CUX2O14529 1486 aa32.45■■■□□ 2.79
RGMA-208ENST00000556658 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
RGMA-208ENST00000556658 WDR97A6NE52 1622 aa32.34■■■□□ 2.77
RGMA-208ENST00000556658 TARBP1Q13395 1621 aaKnown RBP32.32■■■□□ 2.76
RGMA-208ENST00000556658 EHMT2Q96KQ7 1210 aa32.29■■■□□ 2.76
RGMA-208ENST00000556658 IFT140Q96RY7 1462 aa32.27■■■□□ 2.76
RGMA-208ENST00000556658 KIF21BO75037 1637 aa32.24■■■□□ 2.75
RGMA-208ENST00000556658 IGF1RP08069 1367 aa32.2■■■□□ 2.75
RGMA-208ENST00000556658 TDRD9Q8NDG6 1382 aaKnown RBP32.2■■■□□ 2.75
RGMA-208ENST00000556658 GOLGA3Q08378 1498 aa32.18■■■□□ 2.74
RGMA-208ENST00000556658 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
RGMA-208ENST00000556658 GAPVD1Q14C86 1478 aa32.16■■■□□ 2.74
RGMA-208ENST00000556658 PRXQ9BXM0 1461 aa32.15■■■□□ 2.74
RGMA-208ENST00000556658 UBTFP17480 764 aaKnown RBP32.1■■■□□ 2.73
RGMA-208ENST00000556658 ERICH3Q5RHP9 1530 aa32.09■■■□□ 2.73
RGMA-208ENST00000556658 RAPGEF2Q9Y4G8 1499 aa32.07■■■□□ 2.72
RGMA-208ENST00000556658 CARMIL1Q5VZK9 1371 aa32.06■■■□□ 2.72
RGMA-208ENST00000556658 AQRO60306 1485 aaKnown RBP eCLIP32.05■■■□□ 2.72
RGMA-208ENST00000556658 ZNF608Q9ULD9 1512 aaPredicted RBP32.04■■■□□ 2.72
RGMA-208ENST00000556658 CUL7Q14999 1698 aa32.04■■■□□ 2.72
RGMA-208ENST00000556658 TNIKQ9UKE5 1360 aa32.02■■■□□ 2.72
RGMA-208ENST00000556658 PBRM1Q86U86 1689 aa32■■■□□ 2.71
RGMA-208ENST00000556658 GRIN2BQ13224 1484 aa31.96■■■□□ 2.71
RGMA-208ENST00000556658 EIF4G3O43432 1585 aaKnown RBP31.96■■■□□ 2.71
RGMA-208ENST00000556658 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
RGMA-208ENST00000556658 CEP162Q5TB80 1403 aa31.8■■■□□ 2.68
RGMA-208ENST00000556658 ADAMTS12P58397 1594 aa31.78■■■□□ 2.68
RGMA-208ENST00000556658 SNAPC4Q5SXM2 1469 aa31.75■■■□□ 2.67
RGMA-208ENST00000556658 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
RGMA-208ENST00000556658 CLIP1P30622 1438 aa31.65■■■□□ 2.66
RGMA-208ENST00000556658 CTTNBP2Q8WZ74 1663 aa31.63■■■□□ 2.65
RGMA-208ENST00000556658 RANGAP1P46060 587 aaPredicted RBP31.61■■■□□ 2.65
RGMA-208ENST00000556658 SYNJ2O15056 1496 aa31.61■■■□□ 2.65
RGMA-208ENST00000556658 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms