Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
DENND2AQ9ULE3 LINC00273-201ENST00000539813 1452 ntBASIC31.73■■■□□ 2.67
DENND2AQ9ULE3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.73■■■□□ 2.67
DENND2AQ9ULE3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L13-201ENST00000554103 1267 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L15-201ENST00000611059 1267 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L23-201ENST00000615195 1269 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L24-201ENST00000617576 1269 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L22-201ENST00000618238 1269 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L20-201ENST00000619712 1269 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L21-201ENST00000622058 1269 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L10-201ENST00000622460 1267 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 DUX4L25-201ENST00000624915 1269 ntBASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
DENND2AQ9ULE3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.71■■■□□ 2.67
DENND2AQ9ULE3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
DENND2AQ9ULE3 MIR4449-201ENST00000578365 66 ntBASIC31.7■■■□□ 2.67
DENND2AQ9ULE3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.7■■■□□ 2.66
DENND2AQ9ULE3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
DENND2AQ9ULE3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.69■■■□□ 2.66
DENND2AQ9ULE3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.68■■■□□ 2.66
DENND2AQ9ULE3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
DENND2AQ9ULE3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.68■■■□□ 2.66
DENND2AQ9ULE3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.68■■■□□ 2.66
DENND2AQ9ULE3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
DENND2AQ9ULE3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
DENND2AQ9ULE3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
DENND2AQ9ULE3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
DENND2AQ9ULE3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
DENND2AQ9ULE3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
DENND2AQ9ULE3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
DENND2AQ9ULE3 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.66■■■□□ 2.66
DENND2AQ9ULE3 AC127502.1-201ENST00000399971 1502 ntBASIC31.65■■■□□ 2.66
DENND2AQ9ULE3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.64■■■□□ 2.66
DENND2AQ9ULE3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.64■■■□□ 2.66
DENND2AQ9ULE3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
DENND2AQ9ULE3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.63■■■□□ 2.65
DENND2AQ9ULE3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
DENND2AQ9ULE3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
DENND2AQ9ULE3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
DENND2AQ9ULE3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
DENND2AQ9ULE3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
DENND2AQ9ULE3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.61■■■□□ 2.65
DENND2AQ9ULE3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
DENND2AQ9ULE3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.61■■■□□ 2.65
DENND2AQ9ULE3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.61■■■□□ 2.65
DENND2AQ9ULE3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
DENND2AQ9ULE3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
DENND2AQ9ULE3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
DENND2AQ9ULE3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
DENND2AQ9ULE3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DENND2AQ9ULE3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
DENND2AQ9ULE3 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.58■■■□□ 2.65
DENND2AQ9ULE3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.58■■■□□ 2.65
DENND2AQ9ULE3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
DENND2AQ9ULE3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
DENND2AQ9ULE3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
DENND2AQ9ULE3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
DENND2AQ9ULE3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
DENND2AQ9ULE3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
DENND2AQ9ULE3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.5■■■□□ 2.63
DENND2AQ9ULE3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
DENND2AQ9ULE3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
DENND2AQ9ULE3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.48■■■□□ 2.63
DENND2AQ9ULE3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
DENND2AQ9ULE3 AC135983.2-203ENST00000454486 1613 ntBASIC31.48■■■□□ 2.63
DENND2AQ9ULE3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
DENND2AQ9ULE3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
DENND2AQ9ULE3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.47■■■□□ 2.63
DENND2AQ9ULE3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DENND2AQ9ULE3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
DENND2AQ9ULE3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.45■■■□□ 2.63
DENND2AQ9ULE3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
DENND2AQ9ULE3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
DENND2AQ9ULE3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
DENND2AQ9ULE3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.45■■■□□ 2.63
DENND2AQ9ULE3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
DENND2AQ9ULE3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.44■■■□□ 2.62
DENND2AQ9ULE3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.44■■■□□ 2.62
DENND2AQ9ULE3 WHAMMP2-203ENST00000563942 1603 ntBASIC31.44■■■□□ 2.62
DENND2AQ9ULE3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
DENND2AQ9ULE3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
DENND2AQ9ULE3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
DENND2AQ9ULE3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.42■■■□□ 2.62
DENND2AQ9ULE3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
DENND2AQ9ULE3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.41■■■□□ 2.62
DENND2AQ9ULE3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
DENND2AQ9ULE3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DENND2AQ9ULE3 ST7-AS1-201ENST00000456775 1889 ntBASIC31.4■■■□□ 2.62
DENND2AQ9ULE3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
DENND2AQ9ULE3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DENND2AQ9ULE3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
DENND2AQ9ULE3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
DENND2AQ9ULE3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DENND2AQ9ULE3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DENND2AQ9ULE3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
DENND2AQ9ULE3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms