Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RYDENQ9NUL5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.82■■□□□ 1.4
RYDENQ9NUL5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RYDENQ9NUL5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RYDENQ9NUL5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RYDENQ9NUL5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RYDENQ9NUL5 DUX4L11-201ENST00000611504 1267 ntBASIC23.8■■□□□ 1.4
RYDENQ9NUL5 DUX4L12-201ENST00000614593 1267 ntBASIC23.8■■□□□ 1.4
RYDENQ9NUL5 DUX4L14-201ENST00000621227 1267 ntBASIC23.8■■□□□ 1.4
RYDENQ9NUL5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RYDENQ9NUL5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.8■■□□□ 1.4
RYDENQ9NUL5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RYDENQ9NUL5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RYDENQ9NUL5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L13-201ENST00000554103 1267 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L15-201ENST00000611059 1267 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L23-201ENST00000615195 1269 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L24-201ENST00000617576 1269 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L22-201ENST00000618238 1269 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L20-201ENST00000619712 1269 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L21-201ENST00000622058 1269 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L10-201ENST00000622460 1267 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 DUX4L25-201ENST00000624915 1269 ntBASIC23.77■■□□□ 1.4
RYDENQ9NUL5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RYDENQ9NUL5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RYDENQ9NUL5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RYDENQ9NUL5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RYDENQ9NUL5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RYDENQ9NUL5 AC135983.2-203ENST00000454486 1613 ntBASIC23.76■■□□□ 1.39
RYDENQ9NUL5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RYDENQ9NUL5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RYDENQ9NUL5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RYDENQ9NUL5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.75■■□□□ 1.39
RYDENQ9NUL5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RYDENQ9NUL5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RYDENQ9NUL5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.73■■□□□ 1.39
RYDENQ9NUL5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RYDENQ9NUL5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.73■■□□□ 1.39
RYDENQ9NUL5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RYDENQ9NUL5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.72■■□□□ 1.39
RYDENQ9NUL5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.72■■□□□ 1.39
RYDENQ9NUL5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RYDENQ9NUL5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RYDENQ9NUL5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
RYDENQ9NUL5 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.7■■□□□ 1.38
RYDENQ9NUL5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RYDENQ9NUL5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.7■■□□□ 1.38
RYDENQ9NUL5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.7■■□□□ 1.38
RYDENQ9NUL5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 MIR3648-2-201ENST00000581792 180 ntBASIC23.69■■□□□ 1.38
RYDENQ9NUL5 MIR3648-1-201ENST00000615959 180 ntBASIC23.69■■□□□ 1.38
RYDENQ9NUL5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RYDENQ9NUL5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RYDENQ9NUL5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RYDENQ9NUL5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RYDENQ9NUL5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
RYDENQ9NUL5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RYDENQ9NUL5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RYDENQ9NUL5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.65■■□□□ 1.38
RYDENQ9NUL5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RYDENQ9NUL5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RYDENQ9NUL5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RYDENQ9NUL5 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.65■■□□□ 1.38
RYDENQ9NUL5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
RYDENQ9NUL5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RYDENQ9NUL5 MIR639-201ENST00000384974 98 ntBASIC23.64■■□□□ 1.37
RYDENQ9NUL5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.64■■□□□ 1.37
RYDENQ9NUL5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RYDENQ9NUL5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RYDENQ9NUL5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RYDENQ9NUL5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RYDENQ9NUL5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.63■■□□□ 1.37
RYDENQ9NUL5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.63■■□□□ 1.37
RYDENQ9NUL5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.63■■□□□ 1.37
RYDENQ9NUL5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RYDENQ9NUL5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RYDENQ9NUL5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.62■■□□□ 1.37
RYDENQ9NUL5 AC008813.1-201ENST00000536597 885 ntBASIC23.62■■□□□ 1.37
RYDENQ9NUL5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RYDENQ9NUL5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RYDENQ9NUL5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.61■■□□□ 1.37
RYDENQ9NUL5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.61■■□□□ 1.37
RYDENQ9NUL5 CR559946.2-201ENST00000623684 991 ntBASIC23.61■■□□□ 1.37
RYDENQ9NUL5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.6■■□□□ 1.37
RYDENQ9NUL5 WHAMMP2-203ENST00000563942 1603 ntBASIC23.59■■□□□ 1.37
RYDENQ9NUL5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RYDENQ9NUL5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RYDENQ9NUL5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
RYDENQ9NUL5 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms