Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.87■■□□□ 1.57
LRTM1Q9HBL6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
LRTM1Q9HBL6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRTM1Q9HBL6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LRTM1Q9HBL6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 AC127502.1-201ENST00000399971 1502 ntBASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 AP004833.2-201ENST00000532228 1454 ntBASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LRTM1Q9HBL6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 MIR762-201ENST00000390236 83 ntBASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.77■■□□□ 1.56
LRTM1Q9HBL6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.76■■□□□ 1.55
LRTM1Q9HBL6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LRTM1Q9HBL6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LRTM1Q9HBL6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
LRTM1Q9HBL6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.75■■□□□ 1.55
LRTM1Q9HBL6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRTM1Q9HBL6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRTM1Q9HBL6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRTM1Q9HBL6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.73■■□□□ 1.55
LRTM1Q9HBL6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRTM1Q9HBL6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRTM1Q9HBL6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 SUZ12P1-203ENST00000578195 985 ntBASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRTM1Q9HBL6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.66■■□□□ 1.54
LRTM1Q9HBL6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRTM1Q9HBL6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRTM1Q9HBL6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.64■■□□□ 1.54
LRTM1Q9HBL6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms