Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MAP1LC3AQ9H492 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MAP1LC3AQ9H492 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MAP1LC3AQ9H492 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MAP1LC3AQ9H492 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MAP1LC3AQ9H492 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.84■□□□□ 0.61
MAP1LC3AQ9H492 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MAP1LC3AQ9H492 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MAP1LC3AQ9H492 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MAP1LC3AQ9H492 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MAP1LC3AQ9H492 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MAP1LC3AQ9H492 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MAP1LC3AQ9H492 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MAP1LC3AQ9H492 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MAP1LC3AQ9H492 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.82■□□□□ 0.6
MAP1LC3AQ9H492 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MAP1LC3AQ9H492 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MAP1LC3AQ9H492 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MAP1LC3AQ9H492 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MAP1LC3AQ9H492 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.81■□□□□ 0.6
MAP1LC3AQ9H492 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.81■□□□□ 0.6
MAP1LC3AQ9H492 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MAP1LC3AQ9H492 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MAP1LC3AQ9H492 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.8■□□□□ 0.6
MAP1LC3AQ9H492 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MAP1LC3AQ9H492 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MAP1LC3AQ9H492 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MAP1LC3AQ9H492 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MAP1LC3AQ9H492 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MAP1LC3AQ9H492 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MAP1LC3AQ9H492 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MAP1LC3AQ9H492 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MAP1LC3AQ9H492 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MAP1LC3AQ9H492 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MAP1LC3AQ9H492 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MAP1LC3AQ9H492 BX255925.1-201ENST00000566954 1854 ntBASIC18.78■□□□□ 0.6
MAP1LC3AQ9H492 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MAP1LC3AQ9H492 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MAP1LC3AQ9H492 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MAP1LC3AQ9H492 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MAP1LC3AQ9H492 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
MAP1LC3AQ9H492 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.76■□□□□ 0.59
MAP1LC3AQ9H492 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MAP1LC3AQ9H492 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MAP1LC3AQ9H492 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MAP1LC3AQ9H492 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MAP1LC3AQ9H492 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MAP1LC3AQ9H492 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MAP1LC3AQ9H492 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MAP1LC3AQ9H492 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.75■□□□□ 0.59
MAP1LC3AQ9H492 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MAP1LC3AQ9H492 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MAP1LC3AQ9H492 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MAP1LC3AQ9H492 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MAP1LC3AQ9H492 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MAP1LC3AQ9H492 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MAP1LC3AQ9H492 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MAP1LC3AQ9H492 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MAP1LC3AQ9H492 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MAP1LC3AQ9H492 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.73■□□□□ 0.59
MAP1LC3AQ9H492 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.73■□□□□ 0.59
MAP1LC3AQ9H492 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.72■□□□□ 0.59
MAP1LC3AQ9H492 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.71■□□□□ 0.59
MAP1LC3AQ9H492 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MAP1LC3AQ9H492 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MAP1LC3AQ9H492 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MAP1LC3AQ9H492 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MAP1LC3AQ9H492 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MAP1LC3AQ9H492 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.7■□□□□ 0.58
MAP1LC3AQ9H492 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MAP1LC3AQ9H492 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MAP1LC3AQ9H492 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MAP1LC3AQ9H492 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.69■□□□□ 0.58
MAP1LC3AQ9H492 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MAP1LC3AQ9H492 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MAP1LC3AQ9H492 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MAP1LC3AQ9H492 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MAP1LC3AQ9H492 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MAP1LC3AQ9H492 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.68■□□□□ 0.58
MAP1LC3AQ9H492 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MAP1LC3AQ9H492 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MAP1LC3AQ9H492 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.67■□□□□ 0.58
MAP1LC3AQ9H492 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 AL449106.1-201ENST00000608517 1980 ntBASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MAP1LC3AQ9H492 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MAP1LC3AQ9H492 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms