Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC127502.1-201ENST00000399971 1502 ntBASIC31■■■□□ 2.55
RNF20Q5VTR2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31■■■□□ 2.55
RNF20Q5VTR2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RNF20Q5VTR2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.98■■■□□ 2.55
RNF20Q5VTR2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.97■■■□□ 2.55
RNF20Q5VTR2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.97■■■□□ 2.55
RNF20Q5VTR2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RNF20Q5VTR2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.97■■■□□ 2.55
RNF20Q5VTR2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RNF20Q5VTR2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.97■■■□□ 2.55
RNF20Q5VTR2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.96■■■□□ 2.55
RNF20Q5VTR2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RNF20Q5VTR2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RNF20Q5VTR2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
RNF20Q5VTR2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RNF20Q5VTR2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNF20Q5VTR2 AC108673.1-201ENST00000510422 1159 ntBASIC30.94■■■□□ 2.54
RNF20Q5VTR2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNF20Q5VTR2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNF20Q5VTR2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
RNF20Q5VTR2 AP004833.2-201ENST00000532228 1454 ntBASIC30.93■■■□□ 2.54
RNF20Q5VTR2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
RNF20Q5VTR2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RNF20Q5VTR2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RNF20Q5VTR2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
RNF20Q5VTR2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
RNF20Q5VTR2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF20Q5VTR2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
RNF20Q5VTR2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RNF20Q5VTR2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.88■■■□□ 2.53
RNF20Q5VTR2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF20Q5VTR2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF20Q5VTR2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
RNF20Q5VTR2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
RNF20Q5VTR2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RNF20Q5VTR2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
RNF20Q5VTR2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.85■■■□□ 2.53
RNF20Q5VTR2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RNF20Q5VTR2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
RNF20Q5VTR2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.83■■■□□ 2.53
RNF20Q5VTR2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RNF20Q5VTR2 AL162393.1-201ENST00000437852 946 ntBASIC30.83■■■□□ 2.53
RNF20Q5VTR2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.83■■■□□ 2.53
RNF20Q5VTR2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RNF20Q5VTR2 MIR6090-201ENST00000622481 60 ntBASIC30.82■■■□□ 2.52
RNF20Q5VTR2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
RNF20Q5VTR2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
RNF20Q5VTR2 AC087741.3-201ENST00000624270 1347 ntBASIC30.81■■■□□ 2.52
RNF20Q5VTR2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RNF20Q5VTR2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RNF20Q5VTR2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.8■■■□□ 2.52
RNF20Q5VTR2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RNF20Q5VTR2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNF20Q5VTR2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RNF20Q5VTR2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.77■■■□□ 2.52
RNF20Q5VTR2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.76■■■□□ 2.51
RNF20Q5VTR2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RNF20Q5VTR2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.76■■■□□ 2.51
RNF20Q5VTR2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RNF20Q5VTR2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
RNF20Q5VTR2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RNF20Q5VTR2 DRD5P2-201ENST00000421395 2012 ntBASIC30.74■■■□□ 2.51
RNF20Q5VTR2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
RNF20Q5VTR2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RNF20Q5VTR2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.74■■■□□ 2.51
RNF20Q5VTR2 AC142086.6-201ENST00000621154 1765 ntBASIC30.73■■■□□ 2.51
RNF20Q5VTR2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.72■■■□□ 2.51
RNF20Q5VTR2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.72■■■□□ 2.51
RNF20Q5VTR2 AC044849.2-201ENST00000606596 710 ntBASIC30.72■■■□□ 2.51
RNF20Q5VTR2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RNF20Q5VTR2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.71■■■□□ 2.51
RNF20Q5VTR2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RNF20Q5VTR2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RNF20Q5VTR2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RNF20Q5VTR2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.7■■■□□ 2.51
RNF20Q5VTR2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.7■■■□□ 2.51
RNF20Q5VTR2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
RNF20Q5VTR2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
RNF20Q5VTR2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RNF20Q5VTR2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.69■■■□□ 2.5
RNF20Q5VTR2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RNF20Q5VTR2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RNF20Q5VTR2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RNF20Q5VTR2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RNF20Q5VTR2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RNF20Q5VTR2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RNF20Q5VTR2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
RNF20Q5VTR2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RNF20Q5VTR2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.66■■■□□ 2.5
RNF20Q5VTR2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.66■■■□□ 2.5
RNF20Q5VTR2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
RNF20Q5VTR2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
RNF20Q5VTR2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
RNF20Q5VTR2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RNF20Q5VTR2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.65■■■□□ 2.5
RNF20Q5VTR2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RNF20Q5VTR2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.64■■■□□ 2.5
RNF20Q5VTR2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RNF20Q5VTR2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RNF20Q5VTR2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms