Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBR4Q5T4S7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC14.92□□□□□ -0.02
UBR4Q5T4S7 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 WASH5P-204ENST00000632292 975 ntBASIC14.9□□□□□ -0.02
UBR4Q5T4S7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.9□□□□□ -0.02
UBR4Q5T4S7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBR4Q5T4S7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBR4Q5T4S7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBR4Q5T4S7 AL356441.2-201ENST00000443009 864 ntBASIC14.89□□□□□ -0.03
UBR4Q5T4S7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBR4Q5T4S7 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.88□□□□□ -0.03
UBR4Q5T4S7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBR4Q5T4S7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBR4Q5T4S7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBR4Q5T4S7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBR4Q5T4S7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 MIR638-201ENST00000385237 100 ntBASIC14.86□□□□□ -0.03
UBR4Q5T4S7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UBR4Q5T4S7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBR4Q5T4S7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBR4Q5T4S7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
UBR4Q5T4S7 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 AC009299.2-201ENST00000482477 511 ntBASIC14.83□□□□□ -0.04
UBR4Q5T4S7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBR4Q5T4S7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.82□□□□□ -0.04
UBR4Q5T4S7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 ESRRAP2-201ENST00000418437 1549 ntBASIC14.8□□□□□ -0.04
UBR4Q5T4S7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
UBR4Q5T4S7 GUSBP5-201ENST00000418136 578 ntBASIC14.8□□□□□ -0.04
UBR4Q5T4S7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UBR4Q5T4S7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.78□□□□□ -0.04
UBR4Q5T4S7 RP9P-202ENST00000450133 1212 ntBASIC14.78□□□□□ -0.04
UBR4Q5T4S7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBR4Q5T4S7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.77□□□□□ -0.04
UBR4Q5T4S7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBR4Q5T4S7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC14.77□□□□□ -0.05
UBR4Q5T4S7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBR4Q5T4S7 KRT8P33-201ENST00000508125 1423 ntBASIC14.76□□□□□ -0.05
UBR4Q5T4S7 AC008406.3-201ENST00000620001 1374 ntBASIC14.75□□□□□ -0.05
UBR4Q5T4S7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 RARRES2P6-201ENST00000567333 442 ntBASIC14.75□□□□□ -0.05
UBR4Q5T4S7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.75□□□□□ -0.05
UBR4Q5T4S7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 DUX4L18-201ENST00000553347 1267 ntBASIC14.74□□□□□ -0.05
UBR4Q5T4S7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBR4Q5T4S7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
UBR4Q5T4S7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC14.73□□□□□ -0.05
UBR4Q5T4S7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBR4Q5T4S7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBR4Q5T4S7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
UBR4Q5T4S7 AC129492.7-201ENST00000622992 756 ntBASIC14.72□□□□□ -0.05
UBR4Q5T4S7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.72□□□□□ -0.05
UBR4Q5T4S7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms