Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
HTR3AP46098 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HTR3AP46098 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HTR3AP46098 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HTR3AP46098 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HTR3AP46098 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.76■■□□□ 1.39
HTR3AP46098 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTR3AP46098 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTR3AP46098 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTR3AP46098 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
HTR3AP46098 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR3AP46098 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR3AP46098 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.74■■□□□ 1.39
HTR3AP46098 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.74■■□□□ 1.39
HTR3AP46098 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HTR3AP46098 DUX4L28-201ENST00000623687 678 ntBASIC23.74■■□□□ 1.39
HTR3AP46098 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTR3AP46098 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTR3AP46098 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.73■■□□□ 1.39
HTR3AP46098 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTR3AP46098 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HTR3AP46098 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTR3AP46098 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.72■■□□□ 1.39
HTR3AP46098 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HTR3AP46098 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTR3AP46098 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.71■■□□□ 1.39
HTR3AP46098 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
HTR3AP46098 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
HTR3AP46098 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HTR3AP46098 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.7■■□□□ 1.38
HTR3AP46098 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HTR3AP46098 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
HTR3AP46098 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
HTR3AP46098 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.68■■□□□ 1.38
HTR3AP46098 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HTR3AP46098 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3AP46098 AC108673.1-201ENST00000510422 1159 ntBASIC23.67■■□□□ 1.38
HTR3AP46098 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3AP46098 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3AP46098 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.67■■□□□ 1.38
HTR3AP46098 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.66■■□□□ 1.38
HTR3AP46098 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.66■■□□□ 1.38
HTR3AP46098 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.66■■□□□ 1.38
HTR3AP46098 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3AP46098 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3AP46098 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3AP46098 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3AP46098 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3AP46098 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HTR3AP46098 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HTR3AP46098 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HTR3AP46098 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.64■■□□□ 1.37
HTR3AP46098 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR3AP46098 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.63■■□□□ 1.37
HTR3AP46098 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR3AP46098 AL162393.1-201ENST00000437852 946 ntBASIC23.62■■□□□ 1.37
HTR3AP46098 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
HTR3AP46098 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HTR3AP46098 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HTR3AP46098 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HTR3AP46098 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HTR3AP46098 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.6■■□□□ 1.37
HTR3AP46098 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.6■■□□□ 1.37
HTR3AP46098 AC087741.3-201ENST00000624270 1347 ntBASIC23.59■■□□□ 1.37
HTR3AP46098 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HTR3AP46098 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.59■■□□□ 1.37
HTR3AP46098 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.59■■□□□ 1.37
HTR3AP46098 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.59■■□□□ 1.37
HTR3AP46098 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.58■■□□□ 1.37
HTR3AP46098 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
HTR3AP46098 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
HTR3AP46098 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HTR3AP46098 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HTR3AP46098 AC044849.2-201ENST00000606596 710 ntBASIC23.57■■□□□ 1.36
HTR3AP46098 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
HTR3AP46098 AL139393.2-201ENST00000608721 2025 ntBASIC23.56■■□□□ 1.36
HTR3AP46098 AC127502.1-201ENST00000399971 1502 ntBASIC23.56■■□□□ 1.36
HTR3AP46098 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HTR3AP46098 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HTR3AP46098 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
HTR3AP46098 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HTR3AP46098 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HTR3AP46098 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.54■■□□□ 1.36
HTR3AP46098 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.54■■□□□ 1.36
HTR3AP46098 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HTR3AP46098 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
HTR3AP46098 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3AP46098 AP004833.2-201ENST00000532228 1454 ntBASIC23.53■■□□□ 1.36
HTR3AP46098 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3AP46098 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3AP46098 MIR6090-201ENST00000622481 60 ntBASIC23.52■■□□□ 1.36
HTR3AP46098 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HTR3AP46098 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTR3AP46098 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTR3AP46098 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTR3AP46098 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HTR3AP46098 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTR3AP46098 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.5■■□□□ 1.35
HTR3AP46098 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.5■■□□□ 1.35
HTR3AP46098 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms