Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.425e-10■■■■■ 42.9
U2AF2P26368 LARP1-213ENST00000523163 843 ntTSL 58.83□□□□□ -15e-10■■■■■ 42.9
U2AF2P26368 LARP1-205ENST00000518595 773 ntTSL 27.75□□□□□ -1.175e-10■■■■■ 42.9
U2AF2P26368 LARP1-207ENST00000518742 587 ntTSL 57.68□□□□□ -1.185e-10■■■■■ 42.9
U2AF2P26368 APTX-232ENST00000495360 1313 ntTSL 519.2■□□□□ 0.669e-15■■■■■ 42.9
U2AF2P26368 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.159e-15■■■■■ 42.9
U2AF2P26368 APTX-202ENST00000379812 599 ntTSL 515.51■□□□□ 0.079e-15■■■■■ 42.9
U2AF2P26368 APTX-221ENST00000477119 568 ntTSL 314.82□□□□□ -0.049e-15■■■■■ 42.9
U2AF2P26368 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC14.69□□□□□ -0.069e-15■■■■■ 42.9
U2AF2P26368 APTX-203ENST00000379813 1121 ntTSL 5 BASIC14.04□□□□□ -0.169e-15■■■■■ 42.9
U2AF2P26368 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC14.04□□□□□ -0.169e-15■■■■■ 42.9
U2AF2P26368 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.179e-15■■■■■ 42.9
U2AF2P26368 APTX-206ENST00000379825 2023 ntTSL 2 BASIC13.86□□□□□ -0.199e-15■■■■■ 42.9
U2AF2P26368 APTX-233ENST00000496030 633 ntTSL 313.54□□□□□ -0.249e-15■■■■■ 42.9
U2AF2P26368 APTX-227ENST00000485479 1986 ntTSL 1 (best)13.47□□□□□ -0.259e-15■■■■■ 42.9
U2AF2P26368 APTX-213ENST00000465003 1991 ntTSL 1 (best)13.47□□□□□ -0.259e-15■■■■■ 42.9
U2AF2P26368 APTX-208ENST00000436040 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.299e-15■■■■■ 42.9
U2AF2P26368 APTX-223ENST00000479656 1881 ntTSL 1 (best)12.93□□□□□ -0.349e-15■■■■■ 42.9
U2AF2P26368 APTX-230ENST00000494649 2099 ntTSL 1 (best)12.58□□□□□ -0.399e-15■■■■■ 42.9
U2AF2P26368 APTX-209ENST00000460940 1874 ntTSL 1 (best)12.53□□□□□ -0.49e-15■■■■■ 42.9
U2AF2P26368 APTX-225ENST00000482687 1879 ntTSL 1 (best)12.06□□□□□ -0.489e-15■■■■■ 42.9
U2AF2P26368 APTX-204ENST00000379817 2106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.489e-15■■■■■ 42.9
U2AF2P26368 APTX-226ENST00000483148 1764 ntTSL 1 (best)12.05□□□□□ -0.489e-15■■■■■ 42.9
U2AF2P26368 APTX-216ENST00000472896 1759 ntTSL 1 (best)12.05□□□□□ -0.489e-15■■■■■ 42.9
U2AF2P26368 APTX-224ENST00000480031 674 ntTSL 511.91□□□□□ -0.59e-15■■■■■ 42.9
U2AF2P26368 APTX-207ENST00000397172 1740 ntTSL 1 (best) BASIC11.91□□□□□ -0.59e-15■■■■■ 42.9
U2AF2P26368 APTX-217ENST00000473221 687 ntTSL 211.67□□□□□ -0.549e-15■■■■■ 42.9
U2AF2P26368 APTX-212ENST00000464632 679 ntTSL 1 (best)11.67□□□□□ -0.549e-15■■■■■ 42.9
U2AF2P26368 APTX-205ENST00000379819 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.569e-15■■■■■ 42.9
U2AF2P26368 APTX-222ENST00000478279 684 ntTSL 1 (best)11.48□□□□□ -0.579e-15■■■■■ 42.9
U2AF2P26368 APTX-214ENST00000467331 2101 ntTSL 1 (best)11.36□□□□□ -0.599e-15■■■■■ 42.9
U2AF2P26368 APTX-219ENST00000474658 952 ntTSL 510.75□□□□□ -0.699e-15■■■■■ 42.9
U2AF2P26368 APTX-228ENST00000486724 556 ntTSL 49.23□□□□□ -0.939e-15■■■■■ 42.9
U2AF2P26368 SMAD2-206ENST00000586487 564 ntTSL 511.71□□□□□ -0.531e-16■■■■■ 42.9
U2AF2P26368 SMAD2-209ENST00000587353 584 ntTSL 32.21□□□□□ -2.061e-16■■■■■ 42.9
U2AF2P26368 KIAA0100-215ENST00000583403 1271 ntTSL 1 (best)25.18■■□□□ 1.624e-19■■■■■ 42.8
U2AF2P26368 KIAA0100-205ENST00000577417 1839 ntTSL 1 (best)18.63■□□□□ 0.574e-19■■■■■ 42.8
U2AF2P26368 KIAA0100-210ENST00000580882 1582 ntTSL 1 (best)17.16■□□□□ 0.344e-19■■■■■ 42.8
U2AF2P26368 KIAA0100-214ENST00000582901 509 ntTSL 310.23□□□□□ -0.774e-19■■■■■ 42.8
U2AF2P26368 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.56■■□□□ 1.21e-9■■■■■ 42.8
U2AF2P26368 MAX-215ENST00000556892 474 ntTSL 522.1■■□□□ 1.131e-9■■■■■ 42.8
U2AF2P26368 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.41■□□□□ 0.541e-9■■■■■ 42.8
U2AF2P26368 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.9■□□□□ 0.461e-9■■■■■ 42.8
U2AF2P26368 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.371e-9■■■■■ 42.8
U2AF2P26368 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.15■□□□□ 0.341e-9■■■■■ 42.8
U2AF2P26368 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.93■□□□□ 0.31e-9■■■■■ 42.8
U2AF2P26368 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.4■□□□□ 0.221e-9■■■■■ 42.8
U2AF2P26368 MAX-208ENST00000553951 1092 ntTSL 216.11■□□□□ 0.171e-9■■■■■ 42.8
U2AF2P26368 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.1■□□□□ 0.171e-9■■■■■ 42.8
U2AF2P26368 MAX-212ENST00000555932 1673 ntTSL 5 BASIC15.44■□□□□ 0.061e-9■■■■■ 42.8
U2AF2P26368 MAX-206ENST00000394606 2097 ntTSL 1 (best)15.38■□□□□ 0.051e-9■■■■■ 42.8
U2AF2P26368 MAX-214ENST00000556702 520 ntTSL 213.96□□□□□ -0.171e-9■■■■■ 42.8
U2AF2P26368 MAX-216ENST00000556979 615 ntTSL 3 BASIC13.96□□□□□ -0.171e-9■■■■■ 42.8
U2AF2P26368 MAX-209ENST00000554709 327 ntTSL 413.58□□□□□ -0.241e-9■■■■■ 42.8
U2AF2P26368 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC12.64□□□□□ -0.391e-9■■■■■ 42.8
U2AF2P26368 MAX-213ENST00000556443 585 ntTSL 2 BASIC11.59□□□□□ -0.551e-9■■■■■ 42.8
U2AF2P26368 MAX-207ENST00000553928 623 ntTSL 1 (best)8.46□□□□□ -1.061e-9■■■■■ 42.8
U2AF2P26368 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.16□□□□□ -1.421e-9■■■■■ 42.8
U2AF2P26368 PIAS2-215ENST00000592212 2790 ntTSL 53.92□□□□□ -1.784e-7■■■■■ 42.8
U2AF2P26368 SMC4-227ENST00000497984 563 ntTSL 51.37□□□□□ -2.197e-7■■■■■ 42.7
U2AF2P26368 RBM8A-202ENST00000484825 542 ntTSL 513.72□□□□□ -0.211e-14■■■■■ 42.7
U2AF2P26368 RBM8A-209ENST00000634161 464 ntTSL 313.42□□□□□ -0.261e-14■■■■■ 42.7
U2AF2P26368 RBM8A-203ENST00000498663 764 ntTSL 212.94□□□□□ -0.341e-14■■■■■ 42.7
U2AF2P26368 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.691e-7■■■■■ 42.7
U2AF2P26368 DNHD1-204ENST00000473019 1842 ntTSL 215.7■□□□□ 0.17e-9■■■■■ 42.7
U2AF2P26368 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC15.68■□□□□ 0.11e-7■■■■■ 42.7
U2AF2P26368 UAP1L1-203ENST00000474787 4412 ntTSL 214.57□□□□□ -0.081e-7■■■■■ 42.7
U2AF2P26368 AC084337.2-201ENST00000639224 589 ntAPPRIS ALT2 TSL 412.43□□□□□ -0.427e-9■■■■■ 42.7
U2AF2P26368 INTS10-202ENST00000517546 864 ntTSL 216.44■□□□□ 0.223e-15■■■■■ 42.6
U2AF2P26368 PRRC1-206ENST00000513427 837 ntTSL 212.69□□□□□ -0.381e-13■■■■■ 42.6
U2AF2P26368 EIF3D-207ENST00000457241 729 ntTSL 217.37■□□□□ 0.375e-10■■■■■ 42.5
U2AF2P26368 EIF3D-205ENST00000432675 678 ntTSL 212.22□□□□□ -0.455e-10■■■■■ 42.5
U2AF2P26368 EIF3D-206ENST00000455547 996 ntTSL 511.2□□□□□ -0.625e-10■■■■■ 42.5
U2AF2P26368 EIF3D-202ENST00000402116 581 ntTSL 310.97□□□□□ -0.655e-10■■■■■ 42.5
U2AF2P26368 EIF3D-212ENST00000496875 604 ntTSL 49.95□□□□□ -0.825e-10■■■■■ 42.5
U2AF2P26368 C16orf70-210ENST00000569683 905 ntTSL 319.05■□□□□ 0.643e-12■■■■■ 42.5
U2AF2P26368 C16orf70-205ENST00000566026 525 ntTSL 39.86□□□□□ -0.833e-12■■■■■ 42.5
U2AF2P26368 C16orf70-209ENST00000569626 2835 ntTSL 28.17□□□□□ -1.13e-12■■■■■ 42.5
U2AF2P26368 MTUS1-225ENST00000523718 3354 ntTSL 1 (best)14.03□□□□□ -0.165e-9■■■■■ 42.5
U2AF2P26368 MTUS1-208ENST00000518138 570 ntTSL 43.35□□□□□ -1.875e-9■■■■■ 42.5
U2AF2P26368 MTUS1-206ENST00000517721 581 ntTSL 23.33□□□□□ -1.885e-9■■■■■ 42.5
U2AF2P26368 DNAJB11-204ENST00000495390 4079 ntTSL 27.86□□□□□ -1.153e-8■■■■■ 42.4
U2AF2P26368 BTN3A3-209ENST00000483179 1238 ntTSL 212.31□□□□□ -0.443e-8■■■■■ 42.4
U2AF2P26368 BTN3A3-212ENST00000490254 765 ntTSL 311.99□□□□□ -0.493e-8■■■■■ 42.4
U2AF2P26368 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.543e-8■■■■■ 42.4
U2AF2P26368 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.753e-8■■■■■ 42.4
U2AF2P26368 BTN3A3-207ENST00000480110 4547 ntTSL 29.16□□□□□ -0.943e-8■■■■■ 42.4
U2AF2P26368 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.19■□□□□ 0.184e-11■■■■■ 42.3
U2AF2P26368 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.34e-11■■■■■ 42.3
U2AF2P26368 WDR35-204ENST00000445063 2788 ntTSL 26.46□□□□□ -1.384e-11■■■■■ 42.3
U2AF2P26368 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.514e-11■■■■■ 42.3
U2AF2P26368 WDR35-203ENST00000414212 3483 ntTSL 55.53□□□□□ -1.524e-11■■■■■ 42.3
U2AF2P26368 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.479e-7■■■■■ 42.3
U2AF2P26368 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.589e-7■■■■■ 42.3
U2AF2P26368 POGZ-216ENST00000497787 490 ntTSL 28.85□□□□□ -0.997e-34■■■■■ 42.3
U2AF2P26368 POGZ-214ENST00000492528 508 ntTSL 28.74□□□□□ -1.013e-22■■■■■ 42.3
U2AF2P26368 HAL-207ENST00000548636 370 ntTSL 37.51□□□□□ -1.219e-10■■■■■ 42.3
U2AF2P26368 SBF2-202ENST00000420722 1188 ntTSL 57.16□□□□□ -1.269e-10■■■■■ 42.3
U2AF2P26368 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.43□□□□□ -1.79e-10■■■■■ 42.3
U2AF2P26368 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC11.79□□□□□ -0.521e-6■■■■■ 42.2
Retrieved 100 of 36,523 protein–RNA pairs in 869.8 ms