RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
APTX-214ENST00000467331 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
APTX-214ENST00000467331 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.47
APTX-214ENST00000467331 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
APTX-214ENST00000467331 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
APTX-214ENST00000467331 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
APTX-214ENST00000467331 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
APTX-214ENST00000467331 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
APTX-214ENST00000467331 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
APTX-214ENST00000467331 HRCP23327 699 aa16.13■□□□□ 0.17
APTX-214ENST00000467331 ABCC9O60706 1549 aa16.01■□□□□ 0.15
APTX-214ENST00000467331 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
APTX-214ENST00000467331 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
APTX-214ENST00000467331 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
APTX-214ENST00000467331 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
APTX-214ENST00000467331 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
APTX-214ENST00000467331 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
APTX-214ENST00000467331 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
APTX-214ENST00000467331 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
APTX-214ENST00000467331 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
APTX-214ENST00000467331 NACADO15069 1562 aa15.6■□□□□ 0.09
APTX-214ENST00000467331 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
APTX-214ENST00000467331 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
APTX-214ENST00000467331 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
APTX-214ENST00000467331 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
APTX-214ENST00000467331 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
APTX-214ENST00000467331 CECR2Q9BXF3 1484 aa15.37■□□□□ 0.05
APTX-214ENST00000467331 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
APTX-214ENST00000467331 WIZO95785 1651 aa15.32■□□□□ 0.04
APTX-214ENST00000467331 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
APTX-214ENST00000467331 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
APTX-214ENST00000467331 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
APTX-214ENST00000467331 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
APTX-214ENST00000467331 SMARCA2P51531 1590 aa15.08■□□□□ 0
APTX-214ENST00000467331 EEA1Q15075 1411 aa15.05■□□□□ 0
APTX-214ENST00000467331 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
APTX-214ENST00000467331 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
APTX-214ENST00000467331 UNC13AQ9UPW8 1703 aa15.03■□□□□ -0
APTX-214ENST00000467331 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
APTX-214ENST00000467331 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
APTX-214ENST00000467331 CEP162Q5TB80 1403 aa14.95□□□□□ -0.02
APTX-214ENST00000467331 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
APTX-214ENST00000467331 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
APTX-214ENST00000467331 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
APTX-214ENST00000467331 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
APTX-214ENST00000467331 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
APTX-214ENST00000467331 SOGA1O94964 1423 aa14.85□□□□□ -0.03
APTX-214ENST00000467331 CCER1Q8TC90 406 aaPredicted RBP14.85□□□□□ -0.03
APTX-214ENST00000467331 FOXD1Q16676 465 aa14.84□□□□□ -0.03
APTX-214ENST00000467331 KIF21BO75037 1637 aa14.83□□□□□ -0.03
APTX-214ENST00000467331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
APTX-214ENST00000467331 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
APTX-214ENST00000467331 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
APTX-214ENST00000467331 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
APTX-214ENST00000467331 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
APTX-214ENST00000467331 RUSC2Q8N2Y8 1516 aa14.75□□□□□ -0.05
APTX-214ENST00000467331 BAZ1BQ9UIG0 1483 aaKnown RBP14.74□□□□□ -0.05
APTX-214ENST00000467331 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
APTX-214ENST00000467331 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
APTX-214ENST00000467331 CENPBP07199 599 aaPredicted RBP14.67□□□□□ -0.06
APTX-214ENST00000467331 VPS8Q8N3P4 1428 aa14.65□□□□□ -0.06
APTX-214ENST00000467331 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
APTX-214ENST00000467331 UBTFP17480 764 aaKnown RBP14.65□□□□□ -0.06
APTX-214ENST00000467331 NEUROD1Q13562 356 aa14.63□□□□□ -0.07
APTX-214ENST00000467331 CLIP1P30622 1438 aa14.63□□□□□ -0.07
APTX-214ENST00000467331 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
APTX-214ENST00000467331 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
APTX-214ENST00000467331 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
APTX-214ENST00000467331 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
APTX-214ENST00000467331 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
APTX-214ENST00000467331 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
APTX-214ENST00000467331 CLSPNQ9HAW4 1339 aa14.5□□□□□ -0.09
APTX-214ENST00000467331 GTF3C3Q9Y5Q9 886 aa14.49□□□□□ -0.09
APTX-214ENST00000467331 TTBK1Q5TCY1 1321 aaPredicted RBP14.49□□□□□ -0.09
APTX-214ENST00000467331 PRXQ9BXM0 1461 aa14.48□□□□□ -0.09
APTX-214ENST00000467331 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
APTX-214ENST00000467331 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
APTX-214ENST00000467331 APLP2Q06481 763 aa14.42□□□□□ -0.1
APTX-214ENST00000467331 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
APTX-214ENST00000467331 CUX2O14529 1486 aa14.39□□□□□ -0.11
APTX-214ENST00000467331 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
APTX-214ENST00000467331 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
APTX-214ENST00000467331 MYT1Q01538 1121 aa14.38□□□□□ -0.11
APTX-214ENST00000467331 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
APTX-214ENST00000467331 CUX1P39880 1505 aa14.35□□□□□ -0.11
APTX-214ENST00000467331 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
APTX-214ENST00000467331 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
APTX-214ENST00000467331 KIF27Q86VH2 1401 aa14.33□□□□□ -0.12
APTX-214ENST00000467331 MIER1Q8N108 512 aa14.33□□□□□ -0.12
APTX-214ENST00000467331 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
APTX-214ENST00000467331 CFTRP13569 1480 aa14.3□□□□□ -0.12
APTX-214ENST00000467331 MAP3K1Q13233 1512 aa14.3□□□□□ -0.12
APTX-214ENST00000467331 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
APTX-214ENST00000467331 CCNB3Q8WWL7 1395 aa14.21□□□□□ -0.13
APTX-214ENST00000467331 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
APTX-214ENST00000467331 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
APTX-214ENST00000467331 TIAM1Q13009 1591 aa14.18□□□□□ -0.14
APTX-214ENST00000467331 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
APTX-214ENST00000467331 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
APTX-214ENST00000467331 MAPKBP1O60336 1514 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms