RNA–Protein interactions for RNA: ENST00000379812.9

APTX-202, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 599 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-202ENST00000379812 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
APTX-202ENST00000379812 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
APTX-202ENST00000379812 ABCC9O60706 1549 aa26.76■■□□□ 1.87
APTX-202ENST00000379812 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
APTX-202ENST00000379812 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
APTX-202ENST00000379812 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
APTX-202ENST00000379812 NACADO15069 1562 aa26.26■■□□□ 1.79
APTX-202ENST00000379812 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
APTX-202ENST00000379812 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
APTX-202ENST00000379812 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
APTX-202ENST00000379812 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
APTX-202ENST00000379812 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
APTX-202ENST00000379812 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
APTX-202ENST00000379812 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
APTX-202ENST00000379812 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
APTX-202ENST00000379812 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.52
APTX-202ENST00000379812 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
APTX-202ENST00000379812 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
APTX-202ENST00000379812 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
APTX-202ENST00000379812 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
APTX-202ENST00000379812 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
APTX-202ENST00000379812 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
APTX-202ENST00000379812 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
APTX-202ENST00000379812 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
APTX-202ENST00000379812 WIZO95785 1651 aa24.19■■□□□ 1.46
APTX-202ENST00000379812 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
APTX-202ENST00000379812 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
APTX-202ENST00000379812 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
APTX-202ENST00000379812 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
APTX-202ENST00000379812 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
APTX-202ENST00000379812 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
APTX-202ENST00000379812 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
APTX-202ENST00000379812 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
APTX-202ENST00000379812 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
APTX-202ENST00000379812 CFTRP13569 1480 aa23.47■■□□□ 1.35
APTX-202ENST00000379812 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
APTX-202ENST00000379812 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
APTX-202ENST00000379812 NESP48681 1621 aa23.29■■□□□ 1.32
APTX-202ENST00000379812 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
APTX-202ENST00000379812 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
APTX-202ENST00000379812 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
APTX-202ENST00000379812 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
APTX-202ENST00000379812 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
APTX-202ENST00000379812 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
APTX-202ENST00000379812 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
APTX-202ENST00000379812 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
APTX-202ENST00000379812 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
APTX-202ENST00000379812 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
APTX-202ENST00000379812 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
APTX-202ENST00000379812 WDR62O43379 1518 aa22.92■■□□□ 1.26
APTX-202ENST00000379812 CUX1P39880 1505 aa22.9■■□□□ 1.26
APTX-202ENST00000379812 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
APTX-202ENST00000379812 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.26
APTX-202ENST00000379812 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
APTX-202ENST00000379812 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
APTX-202ENST00000379812 TRIM41Q8WV44 630 aa22.83■■□□□ 1.25
APTX-202ENST00000379812 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
APTX-202ENST00000379812 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
APTX-202ENST00000379812 CUX2O14529 1486 aa22.72■■□□□ 1.23
APTX-202ENST00000379812 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
APTX-202ENST00000379812 SOGA1O94964 1423 aa22.65■■□□□ 1.22
APTX-202ENST00000379812 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
APTX-202ENST00000379812 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
APTX-202ENST00000379812 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
APTX-202ENST00000379812 EEA1Q15075 1411 aa22.56■■□□□ 1.2
APTX-202ENST00000379812 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
APTX-202ENST00000379812 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
APTX-202ENST00000379812 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
APTX-202ENST00000379812 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
APTX-202ENST00000379812 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
APTX-202ENST00000379812 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
APTX-202ENST00000379812 ERICH3Q5RHP9 1530 aa22.38■■□□□ 1.17
APTX-202ENST00000379812 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
APTX-202ENST00000379812 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
APTX-202ENST00000379812 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
APTX-202ENST00000379812 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
APTX-202ENST00000379812 CUL7Q14999 1698 aa22.33■■□□□ 1.16
APTX-202ENST00000379812 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
APTX-202ENST00000379812 CSRNP3Q8WYN3 585 aa22.29■■□□□ 1.16
APTX-202ENST00000379812 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
APTX-202ENST00000379812 IGF1RP08069 1367 aa22.26■■□□□ 1.15
APTX-202ENST00000379812 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
APTX-202ENST00000379812 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
APTX-202ENST00000379812 KIF21BO75037 1637 aa22.22■■□□□ 1.15
APTX-202ENST00000379812 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
APTX-202ENST00000379812 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
APTX-202ENST00000379812 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
APTX-202ENST00000379812 CARMIL1Q5VZK9 1371 aa22.19■■□□□ 1.14
APTX-202ENST00000379812 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
APTX-202ENST00000379812 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
APTX-202ENST00000379812 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
APTX-202ENST00000379812 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
APTX-202ENST00000379812 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
APTX-202ENST00000379812 CHD1O14646 1710 aa22■■□□□ 1.11
APTX-202ENST00000379812 FBLN2P98095 1184 aa21.97■■□□□ 1.11
APTX-202ENST00000379812 CTTNBP2Q8WZ74 1663 aa21.95■■□□□ 1.1
APTX-202ENST00000379812 NUP160Q12769 1436 aa21.94■■□□□ 1.1
APTX-202ENST00000379812 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
APTX-202ENST00000379812 TNIKQ9UKE5 1360 aa21.92■■□□□ 1.1
APTX-202ENST00000379812 KIAA0586Q9BVV6 1533 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms