RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
APTX-208ENST00000436040 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.53
APTX-208ENST00000436040 ABCC9O60706 1549 aa23.89■■□□□ 1.41
APTX-208ENST00000436040 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
APTX-208ENST00000436040 NACADO15069 1562 aa23.1■■□□□ 1.29
APTX-208ENST00000436040 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
APTX-208ENST00000436040 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
APTX-208ENST00000436040 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
APTX-208ENST00000436040 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
APTX-208ENST00000436040 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
APTX-208ENST00000436040 SCRIBQ14160 1630 aa22.43■■□□□ 1.18
APTX-208ENST00000436040 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
APTX-208ENST00000436040 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
APTX-208ENST00000436040 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
APTX-208ENST00000436040 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
APTX-208ENST00000436040 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.07
APTX-208ENST00000436040 CC2D2AQ9P2K1 1620 aa21.65■■□□□ 1.06
APTX-208ENST00000436040 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
APTX-208ENST00000436040 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
APTX-208ENST00000436040 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
APTX-208ENST00000436040 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
APTX-208ENST00000436040 SMARCA2P51531 1590 aa21.32■■□□□ 1
APTX-208ENST00000436040 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
APTX-208ENST00000436040 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
APTX-208ENST00000436040 NCAPD3P42695 1498 aa21.29■■□□□ 1
APTX-208ENST00000436040 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
APTX-208ENST00000436040 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
APTX-208ENST00000436040 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
APTX-208ENST00000436040 WIZO95785 1651 aa21.14■□□□□ 0.97
APTX-208ENST00000436040 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
APTX-208ENST00000436040 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
APTX-208ENST00000436040 NESP48681 1621 aa20.71■□□□□ 0.91
APTX-208ENST00000436040 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
APTX-208ENST00000436040 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
APTX-208ENST00000436040 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
APTX-208ENST00000436040 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
APTX-208ENST00000436040 CFTRP13569 1480 aa20.58■□□□□ 0.88
APTX-208ENST00000436040 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
APTX-208ENST00000436040 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
APTX-208ENST00000436040 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
APTX-208ENST00000436040 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
APTX-208ENST00000436040 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
APTX-208ENST00000436040 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
APTX-208ENST00000436040 CUX2O14529 1486 aa20.36■□□□□ 0.85
APTX-208ENST00000436040 MRC2Q9UBG0 1479 aa20.35■□□□□ 0.85
APTX-208ENST00000436040 WDR62O43379 1518 aa20.3■□□□□ 0.84
APTX-208ENST00000436040 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
APTX-208ENST00000436040 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
APTX-208ENST00000436040 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
APTX-208ENST00000436040 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
APTX-208ENST00000436040 CUX1P39880 1505 aa20.03■□□□□ 0.8
APTX-208ENST00000436040 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
APTX-208ENST00000436040 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
APTX-208ENST00000436040 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
APTX-208ENST00000436040 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
APTX-208ENST00000436040 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
APTX-208ENST00000436040 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
APTX-208ENST00000436040 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
APTX-208ENST00000436040 SYNJ1O43426 1573 aa19.89■□□□□ 0.78
APTX-208ENST00000436040 SOGA1O94964 1423 aa19.86■□□□□ 0.77
APTX-208ENST00000436040 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
APTX-208ENST00000436040 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
APTX-208ENST00000436040 EIF4G3O43432 1585 aaKnown RBP19.82■□□□□ 0.76
APTX-208ENST00000436040 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
APTX-208ENST00000436040 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
APTX-208ENST00000436040 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
APTX-208ENST00000436040 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
APTX-208ENST00000436040 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
APTX-208ENST00000436040 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
APTX-208ENST00000436040 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
APTX-208ENST00000436040 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
APTX-208ENST00000436040 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.73
APTX-208ENST00000436040 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.73
APTX-208ENST00000436040 CHD1O14646 1710 aa19.55■□□□□ 0.72
APTX-208ENST00000436040 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
APTX-208ENST00000436040 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
APTX-208ENST00000436040 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
APTX-208ENST00000436040 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
APTX-208ENST00000436040 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
APTX-208ENST00000436040 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
APTX-208ENST00000436040 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
APTX-208ENST00000436040 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
APTX-208ENST00000436040 FBLN2P98095 1184 aa19.43■□□□□ 0.7
APTX-208ENST00000436040 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
APTX-208ENST00000436040 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
APTX-208ENST00000436040 CUL7Q14999 1698 aa19.41■□□□□ 0.7
APTX-208ENST00000436040 IGF1RP08069 1367 aa19.39■□□□□ 0.69
APTX-208ENST00000436040 GRIN2AQ12879 1464 aa19.39■□□□□ 0.69
APTX-208ENST00000436040 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
APTX-208ENST00000436040 CLASP1Q7Z460 1538 aa19.33■□□□□ 0.69
APTX-208ENST00000436040 NUP160Q12769 1436 aa19.3■□□□□ 0.68
APTX-208ENST00000436040 CEP170Q5SW79 1584 aa19.29■□□□□ 0.68
APTX-208ENST00000436040 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
APTX-208ENST00000436040 EEA1Q15075 1411 aa19.24■□□□□ 0.67
APTX-208ENST00000436040 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
APTX-208ENST00000436040 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
APTX-208ENST00000436040 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
APTX-208ENST00000436040 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
APTX-208ENST00000436040 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
APTX-208ENST00000436040 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms