RNA–Protein interactions for RNA: ENST00000468275.5

APTX-215, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,455 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-215ENST00000468275 NISCHQ9Y2I1 1504 aa27.56■■■□□ 2
APTX-215ENST00000468275 ABCC9O60706 1549 aa25.29■■□□□ 1.64
APTX-215ENST00000468275 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.58
APTX-215ENST00000468275 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
APTX-215ENST00000468275 RB1CC1Q8TDY2 1594 aa23.88■■□□□ 1.41
APTX-215ENST00000468275 NACADO15069 1562 aa23.61■■□□□ 1.37
APTX-215ENST00000468275 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
APTX-215ENST00000468275 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
APTX-215ENST00000468275 UNC13AQ9UPW8 1703 aa23.34■■□□□ 1.33
APTX-215ENST00000468275 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
APTX-215ENST00000468275 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
APTX-215ENST00000468275 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
APTX-215ENST00000468275 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
APTX-215ENST00000468275 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
APTX-215ENST00000468275 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
APTX-215ENST00000468275 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
APTX-215ENST00000468275 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
APTX-215ENST00000468275 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
APTX-215ENST00000468275 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
APTX-215ENST00000468275 CUX2O14529 1486 aa21.93■■□□□ 1.1
APTX-215ENST00000468275 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
APTX-215ENST00000468275 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
APTX-215ENST00000468275 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
APTX-215ENST00000468275 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
APTX-215ENST00000468275 NESP48681 1621 aa21.62■■□□□ 1.05
APTX-215ENST00000468275 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
APTX-215ENST00000468275 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
APTX-215ENST00000468275 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
APTX-215ENST00000468275 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
APTX-215ENST00000468275 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
APTX-215ENST00000468275 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
APTX-215ENST00000468275 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
APTX-215ENST00000468275 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
APTX-215ENST00000468275 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
APTX-215ENST00000468275 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
APTX-215ENST00000468275 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
APTX-215ENST00000468275 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
APTX-215ENST00000468275 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
APTX-215ENST00000468275 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
APTX-215ENST00000468275 WDR62O43379 1518 aa21.09■□□□□ 0.97
APTX-215ENST00000468275 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
APTX-215ENST00000468275 WIZO95785 1651 aa20.96■□□□□ 0.95
APTX-215ENST00000468275 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
APTX-215ENST00000468275 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
APTX-215ENST00000468275 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
APTX-215ENST00000468275 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
APTX-215ENST00000468275 CFTRP13569 1480 aa20.82■□□□□ 0.92
APTX-215ENST00000468275 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
APTX-215ENST00000468275 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
APTX-215ENST00000468275 URB2Q14146 1524 aaKnown RBP20.76■□□□□ 0.91
APTX-215ENST00000468275 RIMBP3CA6NJZ7 1639 aa20.65■□□□□ 0.9
APTX-215ENST00000468275 RIMBP3BA6NNM3 1639 aa20.65■□□□□ 0.9
APTX-215ENST00000468275 RIMBP3Q9UFD9 1639 aa20.65■□□□□ 0.9
APTX-215ENST00000468275 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
APTX-215ENST00000468275 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
APTX-215ENST00000468275 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
APTX-215ENST00000468275 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
APTX-215ENST00000468275 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
APTX-215ENST00000468275 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
APTX-215ENST00000468275 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
APTX-215ENST00000468275 CYB5RLQ6IPT4 315 aa20.4■□□□□ 0.86
APTX-215ENST00000468275 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
APTX-215ENST00000468275 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
APTX-215ENST00000468275 CHD1O14646 1710 aa20.35■□□□□ 0.85
APTX-215ENST00000468275 AQRO60306 1485 aaKnown RBP eCLIP20.33■□□□□ 0.85
APTX-215ENST00000468275 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
APTX-215ENST00000468275 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
APTX-215ENST00000468275 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
APTX-215ENST00000468275 FBLN2P98095 1184 aa20.26■□□□□ 0.83
APTX-215ENST00000468275 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
APTX-215ENST00000468275 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
APTX-215ENST00000468275 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.82
APTX-215ENST00000468275 SOGA1O94964 1423 aa20.12■□□□□ 0.81
APTX-215ENST00000468275 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
APTX-215ENST00000468275 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
APTX-215ENST00000468275 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
APTX-215ENST00000468275 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
APTX-215ENST00000468275 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
APTX-215ENST00000468275 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
APTX-215ENST00000468275 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
APTX-215ENST00000468275 GRIN2BQ13224 1484 aa20■□□□□ 0.79
APTX-215ENST00000468275 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
APTX-215ENST00000468275 CUX1P39880 1505 aa19.98■□□□□ 0.79
APTX-215ENST00000468275 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
APTX-215ENST00000468275 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
APTX-215ENST00000468275 ABCA5Q8WWZ7 1642 aa19.81■□□□□ 0.76
APTX-215ENST00000468275 ABCA10Q8WWZ4 1543 aa19.8■□□□□ 0.76
APTX-215ENST00000468275 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
APTX-215ENST00000468275 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
APTX-215ENST00000468275 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
APTX-215ENST00000468275 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
APTX-215ENST00000468275 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
APTX-215ENST00000468275 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
APTX-215ENST00000468275 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
APTX-215ENST00000468275 NUP160Q12769 1436 aa19.69■□□□□ 0.74
APTX-215ENST00000468275 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
APTX-215ENST00000468275 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
APTX-215ENST00000468275 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
APTX-215ENST00000468275 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
APTX-215ENST00000468275 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms