RNA–Protein interactions for RNA: ENST00000379817.6

APTX-204, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 2,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-204ENST00000379817 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
APTX-204ENST00000379817 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.81
APTX-204ENST00000379817 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
APTX-204ENST00000379817 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
APTX-204ENST00000379817 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
APTX-204ENST00000379817 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
APTX-204ENST00000379817 ABCC9O60706 1549 aa18.9■□□□□ 0.62
APTX-204ENST00000379817 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
APTX-204ENST00000379817 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
APTX-204ENST00000379817 NACADO15069 1562 aa18.71■□□□□ 0.59
APTX-204ENST00000379817 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
APTX-204ENST00000379817 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
APTX-204ENST00000379817 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
APTX-204ENST00000379817 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
APTX-204ENST00000379817 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
APTX-204ENST00000379817 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.47
APTX-204ENST00000379817 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
APTX-204ENST00000379817 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
APTX-204ENST00000379817 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
APTX-204ENST00000379817 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
APTX-204ENST00000379817 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
APTX-204ENST00000379817 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
APTX-204ENST00000379817 WIZO95785 1651 aa17.73■□□□□ 0.43
APTX-204ENST00000379817 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
APTX-204ENST00000379817 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
APTX-204ENST00000379817 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
APTX-204ENST00000379817 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
APTX-204ENST00000379817 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
APTX-204ENST00000379817 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
APTX-204ENST00000379817 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
APTX-204ENST00000379817 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
APTX-204ENST00000379817 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
APTX-204ENST00000379817 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
APTX-204ENST00000379817 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
APTX-204ENST00000379817 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
APTX-204ENST00000379817 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.31
APTX-204ENST00000379817 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
APTX-204ENST00000379817 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
APTX-204ENST00000379817 CFTRP13569 1480 aa16.93■□□□□ 0.3
APTX-204ENST00000379817 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
APTX-204ENST00000379817 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
APTX-204ENST00000379817 EEA1Q15075 1411 aa16.82■□□□□ 0.28
APTX-204ENST00000379817 SOGA1O94964 1423 aa16.81■□□□□ 0.28
APTX-204ENST00000379817 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
APTX-204ENST00000379817 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
APTX-204ENST00000379817 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
APTX-204ENST00000379817 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
APTX-204ENST00000379817 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
APTX-204ENST00000379817 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
APTX-204ENST00000379817 CUX1P39880 1505 aa16.71■□□□□ 0.27
APTX-204ENST00000379817 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
APTX-204ENST00000379817 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
APTX-204ENST00000379817 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
APTX-204ENST00000379817 NESP48681 1621 aa16.63■□□□□ 0.25
APTX-204ENST00000379817 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
APTX-204ENST00000379817 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
APTX-204ENST00000379817 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
APTX-204ENST00000379817 KIF21BO75037 1637 aa16.55■□□□□ 0.24
APTX-204ENST00000379817 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
APTX-204ENST00000379817 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
APTX-204ENST00000379817 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
APTX-204ENST00000379817 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
APTX-204ENST00000379817 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
APTX-204ENST00000379817 TOPBP1Q92547 1522 aa16.48■□□□□ 0.23
APTX-204ENST00000379817 CEP162Q5TB80 1403 aa16.48■□□□□ 0.23
APTX-204ENST00000379817 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
APTX-204ENST00000379817 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
APTX-204ENST00000379817 CUX2O14529 1486 aa16.45■□□□□ 0.22
APTX-204ENST00000379817 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
APTX-204ENST00000379817 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
APTX-204ENST00000379817 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
APTX-204ENST00000379817 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
APTX-204ENST00000379817 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
APTX-204ENST00000379817 IGF1RP08069 1367 aa16.38■□□□□ 0.21
APTX-204ENST00000379817 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
APTX-204ENST00000379817 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
APTX-204ENST00000379817 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
APTX-204ENST00000379817 CLIP1P30622 1438 aa16.33■□□□□ 0.2
APTX-204ENST00000379817 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
APTX-204ENST00000379817 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
APTX-204ENST00000379817 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
APTX-204ENST00000379817 RANGAP1P46060 587 aaPredicted RBP16.22■□□□□ 0.19
APTX-204ENST00000379817 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
APTX-204ENST00000379817 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
APTX-204ENST00000379817 ABCA5Q8WWZ7 1642 aa16.2■□□□□ 0.18
APTX-204ENST00000379817 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
APTX-204ENST00000379817 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
APTX-204ENST00000379817 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
APTX-204ENST00000379817 CUL7Q14999 1698 aa16.2■□□□□ 0.18
APTX-204ENST00000379817 WDR62O43379 1518 aa16.2■□□□□ 0.18
APTX-204ENST00000379817 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
APTX-204ENST00000379817 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
APTX-204ENST00000379817 HRCP23327 699 aa16.13■□□□□ 0.17
APTX-204ENST00000379817 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
APTX-204ENST00000379817 APLP2Q06481 763 aa16.1■□□□□ 0.17
APTX-204ENST00000379817 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
APTX-204ENST00000379817 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
APTX-204ENST00000379817 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.16
APTX-204ENST00000379817 GRIN2BQ13224 1484 aa16.05■□□□□ 0.16
APTX-204ENST00000379817 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms