RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
APTX-207ENST00000397172 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
APTX-207ENST00000397172 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
APTX-207ENST00000397172 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
APTX-207ENST00000397172 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
APTX-207ENST00000397172 ABCC9O60706 1549 aa17.72■□□□□ 0.43
APTX-207ENST00000397172 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
APTX-207ENST00000397172 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.37
APTX-207ENST00000397172 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
APTX-207ENST00000397172 NACADO15069 1562 aa17.24■□□□□ 0.35
APTX-207ENST00000397172 DCAF1Q9Y4B6 1507 aa17.23■□□□□ 0.35
APTX-207ENST00000397172 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
APTX-207ENST00000397172 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
APTX-207ENST00000397172 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
APTX-207ENST00000397172 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
APTX-207ENST00000397172 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
APTX-207ENST00000397172 FOXD1Q16676 465 aa16.7■□□□□ 0.26
APTX-207ENST00000397172 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
APTX-207ENST00000397172 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
APTX-207ENST00000397172 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
APTX-207ENST00000397172 HRCP23327 699 aa16.54■□□□□ 0.24
APTX-207ENST00000397172 MYT1Q01538 1121 aa16.51■□□□□ 0.23
APTX-207ENST00000397172 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
APTX-207ENST00000397172 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
APTX-207ENST00000397172 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.17
APTX-207ENST00000397172 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.17
APTX-207ENST00000397172 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
APTX-207ENST00000397172 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
APTX-207ENST00000397172 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
APTX-207ENST00000397172 POTEDQ86YR6 584 aa15.97■□□□□ 0.15
APTX-207ENST00000397172 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
APTX-207ENST00000397172 SMARCA2P51531 1590 aa15.93■□□□□ 0.14
APTX-207ENST00000397172 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
APTX-207ENST00000397172 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
APTX-207ENST00000397172 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
APTX-207ENST00000397172 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
APTX-207ENST00000397172 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
APTX-207ENST00000397172 ZEB1P37275 1124 aaPredicted RBP15.82■□□□□ 0.12
APTX-207ENST00000397172 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
APTX-207ENST00000397172 WIZO95785 1651 aa15.79■□□□□ 0.12
APTX-207ENST00000397172 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.11
APTX-207ENST00000397172 MSH5O43196 834 aa15.69■□□□□ 0.1
APTX-207ENST00000397172 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
APTX-207ENST00000397172 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
APTX-207ENST00000397172 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
APTX-207ENST00000397172 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
APTX-207ENST00000397172 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
APTX-207ENST00000397172 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
APTX-207ENST00000397172 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
APTX-207ENST00000397172 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
APTX-207ENST00000397172 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
APTX-207ENST00000397172 LAMC3Q9Y6N6 1575 aa15.44■□□□□ 0.06
APTX-207ENST00000397172 CFTRP13569 1480 aa15.4■□□□□ 0.06
APTX-207ENST00000397172 NESP48681 1621 aa15.39■□□□□ 0.05
APTX-207ENST00000397172 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
APTX-207ENST00000397172 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
APTX-207ENST00000397172 ACIN1Q9UKV3 1341 aaKnown RBP15.36■□□□□ 0.05
APTX-207ENST00000397172 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
APTX-207ENST00000397172 ERCC6Q03468 1493 aa15.29■□□□□ 0.04
APTX-207ENST00000397172 ADRA2BP18089 450 aa15.29■□□□□ 0.04
APTX-207ENST00000397172 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
APTX-207ENST00000397172 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
APTX-207ENST00000397172 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
APTX-207ENST00000397172 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
APTX-207ENST00000397172 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
APTX-207ENST00000397172 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
APTX-207ENST00000397172 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
APTX-207ENST00000397172 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
APTX-207ENST00000397172 CUX2O14529 1486 aa15.1■□□□□ 0.01
APTX-207ENST00000397172 WDR62O43379 1518 aa15.1■□□□□ 0.01
APTX-207ENST00000397172 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
APTX-207ENST00000397172 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
APTX-207ENST00000397172 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
APTX-207ENST00000397172 TOPBP1Q92547 1522 aa15.02■□□□□ -0
APTX-207ENST00000397172 LOC105371045A0A1W2PR82 267 aa14.99□□□□□ -0.01
APTX-207ENST00000397172 WRNQ14191 1432 aaPredicted RBP eCLIP14.98□□□□□ -0.01
APTX-207ENST00000397172 CUX1P39880 1505 aa14.97□□□□□ -0.01
APTX-207ENST00000397172 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
APTX-207ENST00000397172 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
APTX-207ENST00000397172 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
APTX-207ENST00000397172 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
APTX-207ENST00000397172 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
APTX-207ENST00000397172 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
APTX-207ENST00000397172 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
APTX-207ENST00000397172 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
APTX-207ENST00000397172 SOGA1O94964 1423 aa14.86□□□□□ -0.03
APTX-207ENST00000397172 TARBP1Q13395 1621 aaKnown RBP14.83□□□□□ -0.03
APTX-207ENST00000397172 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
APTX-207ENST00000397172 WDR97A6NE52 1622 aa14.79□□□□□ -0.04
APTX-207ENST00000397172 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
APTX-207ENST00000397172 CCER1Q8TC90 406 aaPredicted RBP14.78□□□□□ -0.04
APTX-207ENST00000397172 ZNF608Q9ULD9 1512 aaPredicted RBP14.77□□□□□ -0.05
APTX-207ENST00000397172 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
APTX-207ENST00000397172 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
APTX-207ENST00000397172 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
APTX-207ENST00000397172 EIF4G3O43432 1585 aaKnown RBP14.73□□□□□ -0.05
APTX-207ENST00000397172 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.05
APTX-207ENST00000397172 ANP32EQ9BTT0 268 aa14.72□□□□□ -0.05
APTX-207ENST00000397172 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
APTX-207ENST00000397172 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms