RNA–Protein interactions for RNA: ENST00000496875.1

EIF3D-212, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

TSL 4

Gene EIF3D, Length 604 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-212ENST00000496875 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
EIF3D-212ENST00000496875 ABCC9O60706 1549 aa21.28■■□□□ 1
EIF3D-212ENST00000496875 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
EIF3D-212ENST00000496875 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
EIF3D-212ENST00000496875 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
EIF3D-212ENST00000496875 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
EIF3D-212ENST00000496875 NACADO15069 1562 aa19.88■□□□□ 0.77
EIF3D-212ENST00000496875 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
EIF3D-212ENST00000496875 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
EIF3D-212ENST00000496875 MYO15BQ96JP2 1530 aa19.47■□□□□ 0.71
EIF3D-212ENST00000496875 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
EIF3D-212ENST00000496875 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
EIF3D-212ENST00000496875 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
EIF3D-212ENST00000496875 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
EIF3D-212ENST00000496875 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
EIF3D-212ENST00000496875 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
EIF3D-212ENST00000496875 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
EIF3D-212ENST00000496875 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
EIF3D-212ENST00000496875 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
EIF3D-212ENST00000496875 CUX2O14529 1486 aa18.46■□□□□ 0.54
EIF3D-212ENST00000496875 ERCC6Q03468 1493 aa18.46■□□□□ 0.54
EIF3D-212ENST00000496875 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
EIF3D-212ENST00000496875 ATAD2BQ9ULI0 1458 aa18.25■□□□□ 0.51
EIF3D-212ENST00000496875 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
EIF3D-212ENST00000496875 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
EIF3D-212ENST00000496875 NESP48681 1621 aa18.14■□□□□ 0.49
EIF3D-212ENST00000496875 SMARCA4P51532 1647 aa18.14■□□□□ 0.49
EIF3D-212ENST00000496875 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
EIF3D-212ENST00000496875 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
EIF3D-212ENST00000496875 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
EIF3D-212ENST00000496875 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
EIF3D-212ENST00000496875 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
EIF3D-212ENST00000496875 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
EIF3D-212ENST00000496875 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
EIF3D-212ENST00000496875 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
EIF3D-212ENST00000496875 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
EIF3D-212ENST00000496875 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
EIF3D-212ENST00000496875 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
EIF3D-212ENST00000496875 WDR62O43379 1518 aa17.7■□□□□ 0.42
EIF3D-212ENST00000496875 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
EIF3D-212ENST00000496875 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
EIF3D-212ENST00000496875 WIZO95785 1651 aa17.62■□□□□ 0.41
EIF3D-212ENST00000496875 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
EIF3D-212ENST00000496875 CFTRP13569 1480 aa17.51■□□□□ 0.39
EIF3D-212ENST00000496875 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
EIF3D-212ENST00000496875 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
EIF3D-212ENST00000496875 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
EIF3D-212ENST00000496875 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
EIF3D-212ENST00000496875 RIMBP3BA6NNM3 1639 aa17.34■□□□□ 0.37
EIF3D-212ENST00000496875 RIMBP3Q9UFD9 1639 aa17.34■□□□□ 0.37
EIF3D-212ENST00000496875 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
EIF3D-212ENST00000496875 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
EIF3D-212ENST00000496875 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
EIF3D-212ENST00000496875 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
EIF3D-212ENST00000496875 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
EIF3D-212ENST00000496875 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
EIF3D-212ENST00000496875 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
EIF3D-212ENST00000496875 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
EIF3D-212ENST00000496875 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
EIF3D-212ENST00000496875 FBLN2P98095 1184 aa17.2■□□□□ 0.34
EIF3D-212ENST00000496875 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
EIF3D-212ENST00000496875 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
EIF3D-212ENST00000496875 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.332e-8■■■■■ 87.8
EIF3D-212ENST00000496875 CHD1O14646 1710 aa17.09■□□□□ 0.33
EIF3D-212ENST00000496875 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
EIF3D-212ENST00000496875 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
EIF3D-212ENST00000496875 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
EIF3D-212ENST00000496875 SOGA1O94964 1423 aa17■□□□□ 0.31
EIF3D-212ENST00000496875 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
EIF3D-212ENST00000496875 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
EIF3D-212ENST00000496875 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
EIF3D-212ENST00000496875 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
EIF3D-212ENST00000496875 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
EIF3D-212ENST00000496875 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
EIF3D-212ENST00000496875 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
EIF3D-212ENST00000496875 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
EIF3D-212ENST00000496875 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
EIF3D-212ENST00000496875 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
EIF3D-212ENST00000496875 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
EIF3D-212ENST00000496875 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
EIF3D-212ENST00000496875 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
EIF3D-212ENST00000496875 CUX1P39880 1505 aa16.78■□□□□ 0.28
EIF3D-212ENST00000496875 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
EIF3D-212ENST00000496875 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
EIF3D-212ENST00000496875 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
EIF3D-212ENST00000496875 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
EIF3D-212ENST00000496875 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
EIF3D-212ENST00000496875 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
EIF3D-212ENST00000496875 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
EIF3D-212ENST00000496875 NUP160Q12769 1436 aa16.55■□□□□ 0.24
EIF3D-212ENST00000496875 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
EIF3D-212ENST00000496875 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
EIF3D-212ENST00000496875 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
EIF3D-212ENST00000496875 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
EIF3D-212ENST00000496875 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
EIF3D-212ENST00000496875 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
EIF3D-212ENST00000496875 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
EIF3D-212ENST00000496875 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
EIF3D-212ENST00000496875 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
EIF3D-212ENST00000496875 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms