RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
APTX-219ENST00000474658 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
APTX-219ENST00000474658 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
APTX-219ENST00000474658 ABCC9O60706 1549 aa19.87■□□□□ 0.77
APTX-219ENST00000474658 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
APTX-219ENST00000474658 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
APTX-219ENST00000474658 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
APTX-219ENST00000474658 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
APTX-219ENST00000474658 NACADO15069 1562 aa19.1■□□□□ 0.65
APTX-219ENST00000474658 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
APTX-219ENST00000474658 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
APTX-219ENST00000474658 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
APTX-219ENST00000474658 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
APTX-219ENST00000474658 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
APTX-219ENST00000474658 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
APTX-219ENST00000474658 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
APTX-219ENST00000474658 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
APTX-219ENST00000474658 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
APTX-219ENST00000474658 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
APTX-219ENST00000474658 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
APTX-219ENST00000474658 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
APTX-219ENST00000474658 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
APTX-219ENST00000474658 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
APTX-219ENST00000474658 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
APTX-219ENST00000474658 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
APTX-219ENST00000474658 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
APTX-219ENST00000474658 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
APTX-219ENST00000474658 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
APTX-219ENST00000474658 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
APTX-219ENST00000474658 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
APTX-219ENST00000474658 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
APTX-219ENST00000474658 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
APTX-219ENST00000474658 WIZO95785 1651 aa17.51■□□□□ 0.39
APTX-219ENST00000474658 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
APTX-219ENST00000474658 NESP48681 1621 aa17.22■□□□□ 0.35
APTX-219ENST00000474658 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
APTX-219ENST00000474658 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
APTX-219ENST00000474658 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
APTX-219ENST00000474658 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
APTX-219ENST00000474658 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
APTX-219ENST00000474658 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
APTX-219ENST00000474658 CFTRP13569 1480 aa17.04■□□□□ 0.32
APTX-219ENST00000474658 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
APTX-219ENST00000474658 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
APTX-219ENST00000474658 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
APTX-219ENST00000474658 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
APTX-219ENST00000474658 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
APTX-219ENST00000474658 CUX2O14529 1486 aa16.87■□□□□ 0.29
APTX-219ENST00000474658 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
APTX-219ENST00000474658 WDR62O43379 1518 aa16.8■□□□□ 0.28
APTX-219ENST00000474658 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.28
APTX-219ENST00000474658 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
APTX-219ENST00000474658 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
APTX-219ENST00000474658 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
APTX-219ENST00000474658 CUX1P39880 1505 aa16.59■□□□□ 0.25
APTX-219ENST00000474658 FOXD1Q16676 465 aa16.56■□□□□ 0.24
APTX-219ENST00000474658 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
APTX-219ENST00000474658 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
APTX-219ENST00000474658 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
APTX-219ENST00000474658 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
APTX-219ENST00000474658 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
APTX-219ENST00000474658 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
APTX-219ENST00000474658 SOGA1O94964 1423 aa16.49■□□□□ 0.23
APTX-219ENST00000474658 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
APTX-219ENST00000474658 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
APTX-219ENST00000474658 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
APTX-219ENST00000474658 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
APTX-219ENST00000474658 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
APTX-219ENST00000474658 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
APTX-219ENST00000474658 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
APTX-219ENST00000474658 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
APTX-219ENST00000474658 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
APTX-219ENST00000474658 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
APTX-219ENST00000474658 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
APTX-219ENST00000474658 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
APTX-219ENST00000474658 GRIN2BQ13224 1484 aa16.27■□□□□ 0.19
APTX-219ENST00000474658 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
APTX-219ENST00000474658 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
APTX-219ENST00000474658 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
APTX-219ENST00000474658 FBLN2P98095 1184 aa16.22■□□□□ 0.19
APTX-219ENST00000474658 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
APTX-219ENST00000474658 CHD1O14646 1710 aa16.19■□□□□ 0.18
APTX-219ENST00000474658 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
APTX-219ENST00000474658 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
APTX-219ENST00000474658 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
APTX-219ENST00000474658 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
APTX-219ENST00000474658 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.18
APTX-219ENST00000474658 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
APTX-219ENST00000474658 IGF1RP08069 1367 aa16.1■□□□□ 0.17
APTX-219ENST00000474658 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
APTX-219ENST00000474658 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
APTX-219ENST00000474658 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
APTX-219ENST00000474658 CUL7Q14999 1698 aa16.02■□□□□ 0.15
APTX-219ENST00000474658 CLASP1Q7Z460 1538 aa16.01■□□□□ 0.15
APTX-219ENST00000474658 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
APTX-219ENST00000474658 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
APTX-219ENST00000474658 NUP160Q12769 1436 aa15.98■□□□□ 0.15
APTX-219ENST00000474658 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
APTX-219ENST00000474658 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
APTX-219ENST00000474658 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms