Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.538e-9■■■■■ 40.6
TROVE2P10155 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.68□□□□□ -2.528e-9■■■■■ 40.6
TROVE2P10155 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.77□□□□□ -2.858e-9■■■■■ 40.6
TROVE2P10155 RPS3-213ENST00000529285 550 ntTSL 519.15■□□□□ 0.662e-58■■■■■ 40.6
TROVE2P10155 RPS3-206ENST00000526248 771 ntTSL 513.87□□□□□ -0.192e-58■■■■■ 40.6
TROVE2P10155 RPS3-212ENST00000529173 1373 ntTSL 513.57□□□□□ -0.242e-58■■■■■ 40.6
TROVE2P10155 RPS3-220ENST00000534555 387 ntTSL 313.55□□□□□ -0.242e-58■■■■■ 40.6
TROVE2P10155 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.81□□□□□ -0.362e-58■■■■■ 40.6
TROVE2P10155 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.462e-58■■■■■ 40.6
TROVE2P10155 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.492e-58■■■■■ 40.6
TROVE2P10155 RPS3-218ENST00000532872 737 ntTSL 311.04□□□□□ -0.642e-58■■■■■ 40.6
TROVE2P10155 RPS3-216ENST00000530721 796 ntTSL 311.04□□□□□ -0.642e-58■■■■■ 40.6
TROVE2P10155 RPS3-202ENST00000422465 903 ntTSL 210.63□□□□□ -0.712e-58■■■■■ 40.6
TROVE2P10155 RPS3-208ENST00000527273 390 ntTSL 39.87□□□□□ -0.832e-58■■■■■ 40.6
TROVE2P10155 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.87□□□□□ -0.832e-58■■■■■ 40.6
TROVE2P10155 RPS3-219ENST00000534440 564 ntTSL 2 BASIC9.78□□□□□ -0.842e-58■■■■■ 40.6
TROVE2P10155 RPS3-204ENST00000525690 421 ntTSL 39.78□□□□□ -0.842e-58■■■■■ 40.6
TROVE2P10155 RPS3-210ENST00000528439 473 ntTSL 39.78□□□□□ -0.842e-58■■■■■ 40.6
TROVE2P10155 RPS3-215ENST00000530170 531 ntTSL 59.51□□□□□ -0.892e-58■■■■■ 40.6
TROVE2P10155 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.982e-58■■■■■ 40.6
TROVE2P10155 RPS3-205ENST00000525933 1307 ntTSL 58.32□□□□□ -1.082e-58■■■■■ 40.6
TROVE2P10155 RPS3-211ENST00000528847 639 ntTSL 58.07□□□□□ -1.122e-58■■■■■ 40.6
TROVE2P10155 RPS3-207ENST00000526608 710 ntTSL 5 BASIC7.55□□□□□ -1.22e-58■■■■■ 40.6
TROVE2P10155 ABRAXAS1-203ENST00000503217 595 ntTSL 419.42■□□□□ 0.72e-7■■■■■ 40.3
TROVE2P10155 ABRAXAS1-207ENST00000511801 682 ntTSL 313.95□□□□□ -0.182e-7■■■■■ 40.3
TROVE2P10155 ABRAXAS1-202ENST00000475656 2718 ntTSL 213.38□□□□□ -0.272e-7■■■■■ 40.3
TROVE2P10155 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC9.21□□□□□ -0.942e-7■■■■■ 40.3
TROVE2P10155 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-7■■■■■ 40.3
TROVE2P10155 ABRAXAS1-205ENST00000505489 847 ntTSL 54.13□□□□□ -1.752e-7■■■■■ 40.3
TROVE2P10155 ADGRG5-203ENST00000394361 1656 ntTSL 218.04■□□□□ 0.482e-8■■■■■ 40
TROVE2P10155 ADGRG5-204ENST00000564607 4768 ntTSL 214.16□□□□□ -0.142e-8■■■■■ 40
TROVE2P10155 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.372e-8■■■■■ 40
TROVE2P10155 ADGRG5-205ENST00000564983 368 ntTSL 312.17□□□□□ -0.462e-8■■■■■ 40
TROVE2P10155 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.82e-8■■■■■ 40
TROVE2P10155 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC9.98□□□□□ -0.812e-8■■■■■ 40
TROVE2P10155 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.66■■□□□ 1.061e-8■■■■■ 39.8
TROVE2P10155 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.91e-8■■■■■ 39.8
TROVE2P10155 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.755e-10■■■■■ 39.8
TROVE2P10155 LRRC27-209ENST00000475747 2660 ntTSL 216.61■□□□□ 0.255e-10■■■■■ 39.8
TROVE2P10155 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 315.64■□□□□ 0.091e-8■■■■■ 39.8
TROVE2P10155 SRSF4-208ENST00000634348 8128 ntTSL 512.64□□□□□ -0.391e-8■■■■■ 39.8
TROVE2P10155 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC12.46□□□□□ -0.425e-10■■■■■ 39.8
TROVE2P10155 LRRC27-206ENST00000462656 2302 ntTSL 210.96□□□□□ -0.655e-10■■■■■ 39.8
TROVE2P10155 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.735e-10■■■■■ 39.8
TROVE2P10155 GDAP1-204ENST00000521096 806 ntTSL 310.44□□□□□ -0.741e-8■■■■■ 39.8
TROVE2P10155 LRRC27-208ENST00000472556 646 ntTSL 1 (best)8.61□□□□□ -1.035e-10■■■■■ 39.8
TROVE2P10155 LRP1-206ENST00000554118 418 ntTSL 27.39□□□□□ -1.235e-8■■■■■ 39.8
TROVE2P10155 GDAP1-203ENST00000520797 735 ntTSL 37.34□□□□□ -1.231e-8■■■■■ 39.8
TROVE2P10155 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.02□□□□□ -2.414e-6■■■■■ 39.7
TROVE2P10155 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC6.8□□□□□ -1.324e-16■■■■■ 39.5
TROVE2P10155 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.56□□□□□ -2.664e-16■■■■■ 39.5
TROVE2P10155 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.21■□□□□ 0.194e-7■■■■■ 39.4
TROVE2P10155 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.27■□□□□ 0.044e-7■■■■■ 39.4
TROVE2P10155 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.02□□□□□ -0.164e-7■■■■■ 39.4
TROVE2P10155 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC12□□□□□ -0.494e-7■■■■■ 39.4
TROVE2P10155 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.814e-7■■■■■ 39.4
TROVE2P10155 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.884e-7■■■■■ 39.4
TROVE2P10155 ATP6V0A1-210ENST00000586315 357 ntTSL 30.74□□□□□ -2.294e-7■■■■■ 39.4
TROVE2P10155 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.565e-9■■■■■ 39
TROVE2P10155 AC073896.1-203ENST00000548360 512 ntTSL 417.61■□□□□ 0.415e-9■■■■■ 39
TROVE2P10155 CNPY2-210ENST00000551720 586 ntTSL 317.61■□□□□ 0.415e-9■■■■■ 39
TROVE2P10155 CNPY2-208ENST00000551286 484 ntTSL 516.28■□□□□ 0.25e-9■■■■■ 39
TROVE2P10155 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.135e-9■■■■■ 39
TROVE2P10155 AC073896.1-202ENST00000547423 566 ntTSL 415.81■□□□□ 0.125e-9■■■■■ 39
TROVE2P10155 CNPY2-209ENST00000551475 674 ntTSL 510.34□□□□□ -0.755e-9■■■■■ 39
TROVE2P10155 CNPY2-204ENST00000546937 984 ntTSL 27.29□□□□□ -1.245e-9■■■■■ 39
TROVE2P10155 CNPY2-212ENST00000553191 621 ntTSL 25.61□□□□□ -1.515e-9■■■■■ 39
TROVE2P10155 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.29■□□□□ 0.842e-8■■■■■ 38.3
TROVE2P10155 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.22■□□□□ 0.512e-8■■■■■ 38.3
TROVE2P10155 MEF2D-205ENST00000475587 1627 ntTSL 517.98■□□□□ 0.472e-8■■■■■ 38.3
TROVE2P10155 MEF2D-206ENST00000489057 593 ntTSL 516.42■□□□□ 0.222e-8■■■■■ 38.3
TROVE2P10155 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.192e-8■■■■■ 38.3
TROVE2P10155 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC13.73□□□□□ -0.212e-8■■■■■ 38.3
TROVE2P10155 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.52e-8■■■■■ 38.3
TROVE2P10155 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC11.34□□□□□ -0.592e-8■■■■■ 38.3
TROVE2P10155 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC10.99□□□□□ -0.652e-8■■■■■ 38.3
TROVE2P10155 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC10.97□□□□□ -0.652e-8■■■■■ 38.3
TROVE2P10155 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.662e-8■■■■■ 38.3
TROVE2P10155 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC10.51□□□□□ -0.732e-8■■■■■ 38.3
TROVE2P10155 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.112e-8■■■■■ 38.3
TROVE2P10155 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.77□□□□□ -1.162e-8■■■■■ 38.3
TROVE2P10155 Y_RNA.203-201ENST00000364106 102 ntBASIC0.28□□□□□ -2.362e-8■■■■■ 38.3
TROVE2P10155 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.21□□□□□ -2.442e-8■■■■■ 38.3
TROVE2P10155 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.02□□□□□ -2.572e-8■■■■■ 38.3
TROVE2P10155 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.69■□□□□ 0.13e-23■■■■■ 38.2
TROVE2P10155 PLEKHA8P1-204ENST00000550498 487 ntTSL 313.2□□□□□ -0.33e-23■■■■■ 38.2
TROVE2P10155 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.19□□□□□ -0.463e-23■■■■■ 38.2
TROVE2P10155 Y_RNA.646-201ENST00000410980 101 ntBASIC0.34□□□□□ -2.362e-7■■■■■ 38.1
TROVE2P10155 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.05□□□□□ -2.083e-8■■■■■ 37.6
TROVE2P10155 AC010542.4-201ENST00000563151 1910 ntBASIC21.77■■□□□ 1.087e-41■■■■■ 37.1
TROVE2P10155 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.6□□□□□ -2.517e-41■■■■■ 37.1
TROVE2P10155 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.345e-16■■■■■ 36.9
TROVE2P10155 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.89□□□□□ -2.555e-11■■■■■ 36.9
TROVE2P10155 Y_RNA.324-201ENST00000365165 102 ntBASIC1.5□□□□□ -2.172e-8■■■■■ 36.8
TROVE2P10155 MT-TG-201ENST00000387429 68 ntBASIC-1.49□□□□□ -2.651e-323■■■■■ 36.4
TROVE2P10155 NEMF-215ENST00000557380 1742 ntTSL 1 (best)8.71□□□□□ -1.028e-16■■■■■ 36.3
TROVE2P10155 NEMF-208ENST00000555970 3029 ntTSL 27.46□□□□□ -1.228e-16■■■■■ 36.3
TROVE2P10155 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.248e-16■■■■■ 36.3
TROVE2P10155 NEMF-205ENST00000554626 570 ntTSL 56.43□□□□□ -1.388e-16■■■■■ 36.3
TROVE2P10155 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.17□□□□□ -2.444e-6■■■■■ 36.3
Retrieved 100 of 4,203 protein–RNA pairs in 170 ms