RNA–Protein interactions for RNA: ENST00000586315.1

ATP6V0A1-210, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-210	ENST00000586315	AEBP2	Q6ZN18	517 aa	Predicted RBP	15.41	■□□□□ 0.06
ATP6V0A1-210	ENST00000586315	CHIC1	Q5VXU3	224 aa		14.66	□□□□□ -0.06
ATP6V0A1-210	ENST00000586315	SENP3	Q9H4L4	574 aa	Predicted RBP	12.98	□□□□□ -0.33
ATP6V0A1-210	ENST00000586315	PHF23	Q9BUL5	403 aa	Predicted RBP	12.95	□□□□□ -0.34
ATP6V0A1-210	ENST00000586315	FOXD1	Q16676	465 aa		12.2	□□□□□ -0.46
ATP6V0A1-210	ENST00000586315	PLPPR3	Q6T4P5	718 aa		11.72	□□□□□ -0.53
ATP6V0A1-210	ENST00000586315	PPP6R1	Q9UPN7	881 aa		11.55	□□□□□ -0.56
ATP6V0A1-210	ENST00000586315	ADRA2B	P18089	450 aa		11.5	□□□□□ -0.57
ATP6V0A1-210	ENST00000586315	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.37	□□□□□ -0.59
ATP6V0A1-210	ENST00000586315	MSH5	O43196	834 aa		11.24	□□□□□ -0.61
ATP6V0A1-210	ENST00000586315	POTED	Q86YR6	584 aa		10.88	□□□□□ -0.67
ATP6V0A1-210	ENST00000586315	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.56	□□□□□ -0.72
ATP6V0A1-210	ENST00000586315	SCAF1	Q9H7N4	1312 aa	Known RBP	10.35	□□□□□ -0.75
ATP6V0A1-210	ENST00000586315	PPP4R3CP	Q6ZMV5	832 aa		10.35	□□□□□ -0.75
ATP6V0A1-210	ENST00000586315	DMRT2	Q9Y5R5	561 aa		10.35	□□□□□ -0.75
ATP6V0A1-210	ENST00000586315	CNKSR2	Q8WXI2	1034 aa		10.07	□□□□□ -0.8
ATP6V0A1-210	ENST00000586315	HOXD11	P31277	338 aa	Predicted RBP	10.02	□□□□□ -0.81
ATP6V0A1-210	ENST00000586315	RNF216	Q9NWF9	866 aa	Predicted RBP	9.95	□□□□□ -0.82
ATP6V0A1-210	ENST00000586315	DCAF8L1	A6NGE4	600 aa		9.94	□□□□□ -0.82
ATP6V0A1-210	ENST00000586315	NCBP3	Q53F19	620 aa	Known RBP	9.89	□□□□□ -0.83
ATP6V0A1-210	ENST00000586315	NPM3	O75607	178 aa	Known RBP	9.86	□□□□□ -0.83
ATP6V0A1-210	ENST00000586315	KCNA4	P22459	653 aa		9.8	□□□□□ -0.84
ATP6V0A1-210	ENST00000586315	RNF39	Q9H2S5	420 aa		9.67	□□□□□ -0.86
ATP6V0A1-210	ENST00000586315	CACNB1	Q02641	598 aa	Predicted RBP	9.63	□□□□□ -0.87
ATP6V0A1-210	ENST00000586315	DNAJC5B	Q9UF47	199 aa		9.56	□□□□□ -0.88
ATP6V0A1-210	ENST00000586315	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	9.53	□□□□□ -0.88	2e-6	■□□□□ 8.5
ATP6V0A1-210	ENST00000586315	C1QBP	Q07021	282 aa	Known RBP	9.48	□□□□□ -0.89
ATP6V0A1-210	ENST00000586315	SLC4A2	P04920	1241 aa		9.42	□□□□□ -0.9
ATP6V0A1-210	ENST00000586315		U3KPZ7	1027 aa	Predicted RBP	9.39	□□□□□ -0.91
ATP6V0A1-210	ENST00000586315	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.26	□□□□□ -0.93
ATP6V0A1-210	ENST00000586315	SLC4A1AP	Q9BWU0	796 aa	Known RBP	9.21	□□□□□ -0.94
ATP6V0A1-210	ENST00000586315	CAPN15	O75808	1086 aa		9.17	□□□□□ -0.94
ATP6V0A1-210	ENST00000586315	DSG3	P32926	999 aa		9.11	□□□□□ -0.95
ATP6V0A1-210	ENST00000586315	TRH	P20396	242 aa	Predicted RBP	9.08	□□□□□ -0.96
ATP6V0A1-210	ENST00000586315	ZBTB22	O15209	634 aa		9.05	□□□□□ -0.96
ATP6V0A1-210	ENST00000586315	MYCN	P04198	464 aa	Predicted RBP	9.04	□□□□□ -0.96
ATP6V0A1-210	ENST00000586315	FOXD4L1	Q9NU39	408 aa		9.03	□□□□□ -0.96
ATP6V0A1-210	ENST00000586315	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.02	□□□□□ -0.97
ATP6V0A1-210	ENST00000586315	ABCB7	O75027	752 aa		9.02	□□□□□ -0.97
ATP6V0A1-210	ENST00000586315	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.02	□□□□□ -0.97
ATP6V0A1-210	ENST00000586315	SAMD1	Q6SPF0	538 aa	Predicted RBP	9.01	□□□□□ -0.97
ATP6V0A1-210	ENST00000586315	APLP2	Q06481	763 aa		8.97	□□□□□ -0.97
ATP6V0A1-210	ENST00000586315	ZNF219	Q9P2Y4	722 aa	Predicted RBP	8.97	□□□□□ -0.97
ATP6V0A1-210	ENST00000586315	ATF5	Q9Y2D1	282 aa	Predicted RBP	8.96	□□□□□ -0.98
ATP6V0A1-210	ENST00000586315	POLA2	Q14181	598 aa		8.87	□□□□□ -0.99
ATP6V0A1-210	ENST00000586315	CSRNP3	Q8WYN3	585 aa		8.72	□□□□□ -1.01
ATP6V0A1-210	ENST00000586315	ATXN8OS	P0DMR3	200 aa		8.69	□□□□□ -1.02
ATP6V0A1-210	ENST00000586315	EHMT2	Q96KQ7	1210 aa		8.65	□□□□□ -1.02
ATP6V0A1-210	ENST00000586315	OSCAR	Q8IYS5	282 aa		8.57	□□□□□ -1.04
ATP6V0A1-210	ENST00000586315	RBM42	Q9BTD8	480 aa	Known RBP	8.57	□□□□□ -1.04
ATP6V0A1-210	ENST00000586315	ZBTB12	Q9Y330	459 aa	Predicted RBP	8.55	□□□□□ -1.04
ATP6V0A1-210	ENST00000586315	MKRN4P	Q13434	485 aa	Predicted RBP	8.53	□□□□□ -1.04
ATP6V0A1-210	ENST00000586315	POTEH	Q6S545	545 aa		8.52	□□□□□ -1.05
ATP6V0A1-210	ENST00000586315	AKT1S1	Q96B36	256 aa		8.45	□□□□□ -1.06
ATP6V0A1-210	ENST00000586315	FBLN2	P98095	1184 aa		8.44	□□□□□ -1.06
ATP6V0A1-210	ENST00000586315	REM2	Q8IYK8	340 aa	Predicted RBP	8.43	□□□□□ -1.06
ATP6V0A1-210	ENST00000586315	CHRDL2	Q6WN34	429 aa		8.42	□□□□□ -1.06
ATP6V0A1-210	ENST00000586315	SPDYE2B	A6NHP3	402 aa		8.35	□□□□□ -1.07
ATP6V0A1-210	ENST00000586315	SPDYE6	P0CI01	402 aa		8.35	□□□□□ -1.07
ATP6V0A1-210	ENST00000586315	SPDYE2	Q495Y8	402 aa		8.35	□□□□□ -1.07
ATP6V0A1-210	ENST00000586315	PITPNM1	O00562	1244 aa		8.34	□□□□□ -1.07
ATP6V0A1-210	ENST00000586315	ZNF692	Q9BU19	519 aa	Predicted RBP	8.32	□□□□□ -1.08
ATP6V0A1-210	ENST00000586315	SSUH2	Q9Y2M2	353 aa		8.3	□□□□□ -1.08
ATP6V0A1-210	ENST00000586315	PIP4P2	Q8N4L2	257 aa		8.28	□□□□□ -1.08
ATP6V0A1-210	ENST00000586315	FXR2	P51116	673 aa	Known RBP eCLIP	8.23	□□□□□ -1.09
ATP6V0A1-210	ENST00000586315	CLEC11A	Q9Y240	323 aa		8.23	□□□□□ -1.09
ATP6V0A1-210	ENST00000586315	PABPN1	Q86U42	306 aa	Known RBP eCLIP	8.22	□□□□□ -1.09
ATP6V0A1-210	ENST00000586315	SPDYE1	Q8NFV5	336 aa	Predicted RBP	8.18	□□□□□ -1.1
ATP6V0A1-210	ENST00000586315	PRKAR2A	P13861	404 aa	Known RBP	8.12	□□□□□ -1.11
ATP6V0A1-210	ENST00000586315	SPDYE4	A6NLX3	237 aa		8.11	□□□□□ -1.11
ATP6V0A1-210	ENST00000586315	CHADL	Q6NUI6	762 aa		8.11	□□□□□ -1.11
ATP6V0A1-210	ENST00000586315	EVX2	Q03828	476 aa		8.1	□□□□□ -1.11
ATP6V0A1-210	ENST00000586315	HAX1	O00165	279 aa		8.08	□□□□□ -1.12
ATP6V0A1-210	ENST00000586315	PRR29	P0C7W0	189 aa		8.08	□□□□□ -1.12
ATP6V0A1-210	ENST00000586315	SP7	Q8TDD2	431 aa	Predicted RBP	8.03	□□□□□ -1.12
ATP6V0A1-210	ENST00000586315	C19orf67	A6NJJ6	358 aa		7.96	□□□□□ -1.14
ATP6V0A1-210	ENST00000586315	CREBZF	Q9NS37	354 aa		7.96	□□□□□ -1.14
ATP6V0A1-210	ENST00000586315	PROM2	Q8N271	834 aa		7.94	□□□□□ -1.14
ATP6V0A1-210	ENST00000586315	FARP1	Q9Y4F1	1045 aa	Predicted RBP	7.94	□□□□□ -1.14
ATP6V0A1-210	ENST00000586315	STAG3	Q9UJ98	1225 aa		7.93	□□□□□ -1.14
ATP6V0A1-210	ENST00000586315	FKBP8	Q14318	412 aa		7.86	□□□□□ -1.15
ATP6V0A1-210	ENST00000586315	CD44	P16070	742 aa	Known RBP	7.85	□□□□□ -1.15
ATP6V0A1-210	ENST00000586315	MNX1	P50219	401 aa	Predicted RBP	7.85	□□□□□ -1.15
ATP6V0A1-210	ENST00000586315	GABBR2	O75899	941 aa		7.84	□□□□□ -1.15
ATP6V0A1-210	ENST00000586315	ZRANB1	Q9UGI0	708 aa		7.78	□□□□□ -1.16
ATP6V0A1-210	ENST00000586315	MIER1	Q8N108	512 aa		7.74	□□□□□ -1.17
ATP6V0A1-210	ENST00000586315	POTEI	P0CG38	1075 aa		7.73	□□□□□ -1.17
ATP6V0A1-210	ENST00000586315	ZNF579	Q8NAF0	562 aa	Known RBP	7.72	□□□□□ -1.17
ATP6V0A1-210	ENST00000586315	NPM1	P06748	294 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
ATP6V0A1-210	ENST00000586315	PHF12	Q96QT6	1004 aa		7.71	□□□□□ -1.18
ATP6V0A1-210	ENST00000586315	GALR2	O43603	387 aa	Predicted RBP	7.69	□□□□□ -1.18
ATP6V0A1-210	ENST00000586315	TSPYL2	Q9H2G4	693 aa	Predicted RBP	7.67	□□□□□ -1.18
ATP6V0A1-210	ENST00000586315	PLCD3	Q8N3E9	789 aa		7.66	□□□□□ -1.18
ATP6V0A1-210	ENST00000586315	RASEF	Q8IZ41	740 aa		7.65	□□□□□ -1.18
ATP6V0A1-210	ENST00000586315	PAK3	O75914	559 aa	Predicted RBP	7.64	□□□□□ -1.19
ATP6V0A1-210	ENST00000586315	CCDC61	Q9Y6R9	512 aa		7.62	□□□□□ -1.19
ATP6V0A1-210	ENST00000586315	PLEKHG5	O94827	1062 aa		7.6	□□□□□ -1.19
ATP6V0A1-210	ENST00000586315	CLCN6	P51797	869 aa		7.6	□□□□□ -1.19
ATP6V0A1-210	ENST00000586315	NUBP1	P53384	320 aa		7.6	□□□□□ -1.19
ATP6V0A1-210	ENST00000586315	DCBLD2	Q96PD2	775 aa		7.6	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms