RNA–Protein interactions for RNA: ENST00000513458.8

SREK1IP1-204, Transcript of SREK1 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREK1IP1, Length 6,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-204ENST00000513458 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.49
SREK1IP1-204ENST00000513458 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
SREK1IP1-204ENST00000513458 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
SREK1IP1-204ENST00000513458 SUPT5HO00267 1087 aaKnown RBP10.82□□□□□ -0.68
SREK1IP1-204ENST00000513458 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
SREK1IP1-204ENST00000513458 ABCC9O60706 1549 aa10.19□□□□□ -0.78
SREK1IP1-204ENST00000513458 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
SREK1IP1-204ENST00000513458 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
SREK1IP1-204ENST00000513458 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
SREK1IP1-204ENST00000513458 APLP2Q06481 763 aa9.96□□□□□ -0.81
SREK1IP1-204ENST00000513458 PABPN1Q86U42 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
SREK1IP1-204ENST00000513458 ZCCHC6Q5VYS8 1495 aaKnown RBP9.93□□□□□ -0.82
SREK1IP1-204ENST00000513458 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
SREK1IP1-204ENST00000513458 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
SREK1IP1-204ENST00000513458 TTBK1Q5TCY1 1321 aaPredicted RBP9.86□□□□□ -0.83
SREK1IP1-204ENST00000513458 CHIC1Q5VXU3 224 aa9.82□□□□□ -0.84
SREK1IP1-204ENST00000513458 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
SREK1IP1-204ENST00000513458 SCRIBQ14160 1630 aa9.82□□□□□ -0.84
SREK1IP1-204ENST00000513458 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
SREK1IP1-204ENST00000513458 LOC105371045A0A1W2PR82 267 aa9.71□□□□□ -0.85
SREK1IP1-204ENST00000513458 RB1CC1Q8TDY2 1594 aa9.67□□□□□ -0.86
SREK1IP1-204ENST00000513458 PPARGC1BQ86YN6 1023 aaKnown RBP9.64□□□□□ -0.87
SREK1IP1-204ENST00000513458 NACADO15069 1562 aa9.64□□□□□ -0.87
SREK1IP1-204ENST00000513458 CCER1Q8TC90 406 aaPredicted RBP9.6□□□□□ -0.87
SREK1IP1-204ENST00000513458 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
SREK1IP1-204ENST00000513458 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
SREK1IP1-204ENST00000513458 ZEB1P37275 1124 aaPredicted RBP9.55□□□□□ -0.88
SREK1IP1-204ENST00000513458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.47□□□□□ -0.89
SREK1IP1-204ENST00000513458 HNRNPUL2Q1KMD3 747 aaKnown RBP9.47□□□□□ -0.89
SREK1IP1-204ENST00000513458 RSF1Q96T23 1441 aaPredicted RBP9.45□□□□□ -0.9
SREK1IP1-204ENST00000513458 ITGAEP38570 1179 aa9.43□□□□□ -0.9
SREK1IP1-204ENST00000513458 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
SREK1IP1-204ENST00000513458 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
SREK1IP1-204ENST00000513458 CECR2Q9BXF3 1484 aa9.36□□□□□ -0.91
SREK1IP1-204ENST00000513458 MYO15BQ96JP2 1530 aa9.34□□□□□ -0.91
SREK1IP1-204ENST00000513458 FBLN2P98095 1184 aa9.34□□□□□ -0.91
SREK1IP1-204ENST00000513458 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
SREK1IP1-204ENST00000513458 HRCP23327 699 aa9.32□□□□□ -0.92
SREK1IP1-204ENST00000513458 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
SREK1IP1-204ENST00000513458 FAM50AQ14320 339 aaKnown RBP9.28□□□□□ -0.92
SREK1IP1-204ENST00000513458 P3H3Q8IVL6 736 aa9.27□□□□□ -0.92
SREK1IP1-204ENST00000513458 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
SREK1IP1-204ENST00000513458 PELP1Q8IZL8 1130 aaKnown RBP9.24□□□□□ -0.93
SREK1IP1-204ENST00000513458 CENPBP07199 599 aaPredicted RBP9.23□□□□□ -0.93
SREK1IP1-204ENST00000513458 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
SREK1IP1-204ENST00000513458 WIZO95785 1651 aa9.19□□□□□ -0.94
SREK1IP1-204ENST00000513458 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
SREK1IP1-204ENST00000513458 SMARCA2P51531 1590 aa9.17□□□□□ -0.94
SREK1IP1-204ENST00000513458 EEA1Q15075 1411 aa9.15□□□□□ -0.94
SREK1IP1-204ENST00000513458 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.94
SREK1IP1-204ENST00000513458 TRIM52Q96A61 297 aa9.15□□□□□ -0.95
SREK1IP1-204ENST00000513458 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
SREK1IP1-204ENST00000513458 POLR3GLQ9BT43 218 aa9.12□□□□□ -0.95
SREK1IP1-204ENST00000513458 SMARCA4P51532 1647 aa9.11□□□□□ -0.95
SREK1IP1-204ENST00000513458 TOP2AP11388 1531 aaKnown RBP9.11□□□□□ -0.95
SREK1IP1-204ENST00000513458 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
SREK1IP1-204ENST00000513458 GOLGA3Q08378 1498 aa9.1□□□□□ -0.95
SREK1IP1-204ENST00000513458 KIF27Q86VH2 1401 aa9.1□□□□□ -0.95
SREK1IP1-204ENST00000513458 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
SREK1IP1-204ENST00000513458 CLIP1P30622 1438 aa9.1□□□□□ -0.95
SREK1IP1-204ENST00000513458 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
SREK1IP1-204ENST00000513458 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
SREK1IP1-204ENST00000513458 CEP162Q5TB80 1403 aa9.06□□□□□ -0.96
SREK1IP1-204ENST00000513458 ERCC6Q03468 1493 aa9.06□□□□□ -0.96
SREK1IP1-204ENST00000513458 ZNF777Q9ULD5 760 aaPredicted RBP9.06□□□□□ -0.96
SREK1IP1-204ENST00000513458 ATAD2BQ9ULI0 1458 aa9.06□□□□□ -0.96
SREK1IP1-204ENST00000513458 CEP164Q9UPV0 1460 aa9.05□□□□□ -0.96
SREK1IP1-204ENST00000513458 DIEXFQ68CQ4 756 aaKnown RBP9.03□□□□□ -0.96
SREK1IP1-204ENST00000513458 SOGA1O94964 1423 aa9.03□□□□□ -0.96
SREK1IP1-204ENST00000513458 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.96
SREK1IP1-204ENST00000513458 CNGB1Q14028 1251 aaPredicted RBP9.02□□□□□ -0.97
SREK1IP1-204ENST00000513458 NEFLP07196 543 aa9.01□□□□□ -0.97
SREK1IP1-204ENST00000513458 CUX2O14529 1486 aa9□□□□□ -0.97
SREK1IP1-204ENST00000513458 MTUS2Q5JR59 1369 aa9□□□□□ -0.97
SREK1IP1-204ENST00000513458 PDS5BQ9NTI5 1447 aa8.98□□□□□ -0.97
SREK1IP1-204ENST00000513458 ZNF326Q5BKZ1 582 aaKnown RBP8.97□□□□□ -0.97
SREK1IP1-204ENST00000513458 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
SREK1IP1-204ENST00000513458 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
SREK1IP1-204ENST00000513458 CARMIL1Q5VZK9 1371 aa8.96□□□□□ -0.97
SREK1IP1-204ENST00000513458 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
SREK1IP1-204ENST00000513458 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
SREK1IP1-204ENST00000513458 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
SREK1IP1-204ENST00000513458 EIF4G1Q04637 1599 aaKnown RBP8.92□□□□□ -0.98
SREK1IP1-204ENST00000513458 TDRD9Q8NDG6 1382 aaKnown RBP8.89□□□□□ -0.99
SREK1IP1-204ENST00000513458 TSPY4P0CV99 314 aa8.89□□□□□ -0.99
SREK1IP1-204ENST00000513458 TSPY10P0CW01 314 aa8.89□□□□□ -0.99
SREK1IP1-204ENST00000513458 PLEKHD1A6NEE1 506 aa8.89□□□□□ -0.99
SREK1IP1-204ENST00000513458 TONSLQ96HA7 1378 aa8.87□□□□□ -0.99
SREK1IP1-204ENST00000513458 NCAPD3P42695 1498 aa8.87□□□□□ -0.99
SREK1IP1-204ENST00000513458 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
SREK1IP1-204ENST00000513458 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
SREK1IP1-204ENST00000513458 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
SREK1IP1-204ENST00000513458 ANP32CO43423 234 aa8.86□□□□□ -0.99
SREK1IP1-204ENST00000513458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.85□□□□□ -0.99
SREK1IP1-204ENST00000513458 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -0.99
SREK1IP1-204ENST00000513458 UNC13AQ9UPW8 1703 aa8.83□□□□□ -1
SREK1IP1-204ENST00000513458 RUSC2Q8N2Y8 1516 aa8.83□□□□□ -1
SREK1IP1-204ENST00000513458 VPS8Q8N3P4 1428 aa8.83□□□□□ -1
SREK1IP1-204ENST00000513458 BICRAQ9NZM4 1560 aa8.82□□□□□ -1
SREK1IP1-204ENST00000513458 CFDP1Q9UEE9 299 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms