Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.97■■□□□ 1.11
PRAF2O60831 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAF2O60831 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAF2O60831 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.96■■□□□ 1.11
PRAF2O60831 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAF2O60831 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAF2O60831 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAF2O60831 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAF2O60831 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAF2O60831 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAF2O60831 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PRAF2O60831 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAF2O60831 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAF2O60831 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.94■■□□□ 1.1
PRAF2O60831 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAF2O60831 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAF2O60831 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.94■■□□□ 1.1
PRAF2O60831 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PRAF2O60831 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRAF2O60831 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAF2O60831 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAF2O60831 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PRAF2O60831 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAF2O60831 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAF2O60831 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAF2O60831 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.91■■□□□ 1.1
PRAF2O60831 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAF2O60831 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRAF2O60831 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAF2O60831 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRAF2O60831 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRAF2O60831 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRAF2O60831 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRAF2O60831 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAF2O60831 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PRAF2O60831 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAF2O60831 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAF2O60831 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PRAF2O60831 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRAF2O60831 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.87■■□□□ 1.09
PRAF2O60831 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAF2O60831 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAF2O60831 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.87■■□□□ 1.09
PRAF2O60831 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRAF2O60831 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAF2O60831 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAF2O60831 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
PRAF2O60831 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAF2O60831 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAF2O60831 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAF2O60831 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAF2O60831 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAF2O60831 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAF2O60831 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
PRAF2O60831 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PRAF2O60831 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAF2O60831 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAF2O60831 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PRAF2O60831 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAF2O60831 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.81■■□□□ 1.08
PRAF2O60831 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PRAF2O60831 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.81■■□□□ 1.08
PRAF2O60831 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAF2O60831 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PRAF2O60831 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAF2O60831 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAF2O60831 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAF2O60831 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAF2O60831 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAF2O60831 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAF2O60831 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAF2O60831 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAF2O60831 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAF2O60831 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAF2O60831 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PRAF2O60831 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAF2O60831 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAF2O60831 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.78■■□□□ 1.08
PRAF2O60831 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAF2O60831 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAF2O60831 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.77■■□□□ 1.08
PRAF2O60831 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.77■■□□□ 1.08
PRAF2O60831 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAF2O60831 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAF2O60831 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.76■■□□□ 1.07
PRAF2O60831 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAF2O60831 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAF2O60831 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PRAF2O60831 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.75■■□□□ 1.07
PRAF2O60831 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.75■■□□□ 1.07
PRAF2O60831 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAF2O60831 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAF2O60831 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAF2O60831 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAF2O60831 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAF2O60831 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAF2O60831 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAF2O60831 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAF2O60831 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PRAF2O60831 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms