Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA1O15239 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NDUFA1O15239 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA1O15239 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFA1O15239 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFA1O15239 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFA1O15239 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFA1O15239 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
NDUFA1O15239 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFA1O15239 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.58■□□□□ 0.41
NDUFA1O15239 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.58■□□□□ 0.41
NDUFA1O15239 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.58■□□□□ 0.4
NDUFA1O15239 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFA1O15239 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA1O15239 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.56■□□□□ 0.4
NDUFA1O15239 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA1O15239 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA1O15239 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NDUFA1O15239 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA1O15239 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NDUFA1O15239 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
NDUFA1O15239 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA1O15239 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NDUFA1O15239 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA1O15239 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NDUFA1O15239 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 BX255925.1-201ENST00000566954 1854 ntBASIC17.53■□□□□ 0.4
NDUFA1O15239 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.52■□□□□ 0.4
NDUFA1O15239 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFA1O15239 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA1O15239 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA1O15239 WASH5P-204ENST00000632292 975 ntBASIC17.51■□□□□ 0.39
NDUFA1O15239 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA1O15239 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFA1O15239 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA1O15239 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFA1O15239 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFA1O15239 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA1O15239 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA1O15239 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NDUFA1O15239 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA1O15239 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NDUFA1O15239 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA1O15239 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA1O15239 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA1O15239 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFA1O15239 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFA1O15239 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA1O15239 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFA1O15239 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA1O15239 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NDUFA1O15239 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFA1O15239 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA1O15239 AL133380.1-201ENST00000506013 324 ntBASIC17.45■□□□□ 0.38
NDUFA1O15239 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA1O15239 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NDUFA1O15239 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA1O15239 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA1O15239 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDUFA1O15239 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDUFA1O15239 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.42■□□□□ 0.38
NDUFA1O15239 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NDUFA1O15239 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms