Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV13-1A0A0B4J241 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV13-1A0A0B4J241 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV13-1A0A0B4J241 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV13-1A0A0B4J241 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV13-1A0A0B4J241 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TRAV13-1A0A0B4J241 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV13-1A0A0B4J241 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV13-1A0A0B4J241 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV13-1A0A0B4J241 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV13-1A0A0B4J241 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
TRAV13-1A0A0B4J241 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV13-1A0A0B4J241 AL133380.1-201ENST00000506013 324 ntBASIC17.85■□□□□ 0.45
TRAV13-1A0A0B4J241 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV13-1A0A0B4J241 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV13-1A0A0B4J241 AC010864.1-201ENST00000609407 1511 ntBASIC17.83■□□□□ 0.45
TRAV13-1A0A0B4J241 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV13-1A0A0B4J241 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV13-1A0A0B4J241 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-1A0A0B4J241 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV13-1A0A0B4J241 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-1A0A0B4J241 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV13-1A0A0B4J241 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV13-1A0A0B4J241 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRAV13-1A0A0B4J241 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV13-1A0A0B4J241 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV13-1A0A0B4J241 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV13-1A0A0B4J241 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV13-1A0A0B4J241 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV13-1A0A0B4J241 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV13-1A0A0B4J241 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV13-1A0A0B4J241 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TRAV13-1A0A0B4J241 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV13-1A0A0B4J241 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV13-1A0A0B4J241 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV13-1A0A0B4J241 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV13-1A0A0B4J241 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV13-1A0A0B4J241 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-1A0A0B4J241 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-1A0A0B4J241 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV13-1A0A0B4J241 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-1A0A0B4J241 AL121749.1-202ENST00000609313 2153 ntBASIC17.76■□□□□ 0.43
TRAV13-1A0A0B4J241 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-1A0A0B4J241 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV13-1A0A0B4J241 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV13-1A0A0B4J241 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV13-1A0A0B4J241 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV13-1A0A0B4J241 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-1A0A0B4J241 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-1A0A0B4J241 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-1A0A0B4J241 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-1A0A0B4J241 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV13-1A0A0B4J241 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV13-1A0A0B4J241 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV13-1A0A0B4J241 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV13-1A0A0B4J241 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV13-1A0A0B4J241 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV13-1A0A0B4J241 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV13-1A0A0B4J241 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV13-1A0A0B4J241 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-1A0A0B4J241 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-1A0A0B4J241 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-1A0A0B4J241 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-1A0A0B4J241 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV13-1A0A0B4J241 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV13-1A0A0B4J241 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-1A0A0B4J241 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-1A0A0B4J241 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-1A0A0B4J241 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAV13-1A0A0B4J241 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-1A0A0B4J241 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV13-1A0A0B4J241 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV13-1A0A0B4J241 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRAV13-1A0A0B4J241 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV13-1A0A0B4J241 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV13-1A0A0B4J241 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV13-1A0A0B4J241 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV13-1A0A0B4J241 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV13-1A0A0B4J241 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms