Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC31.5■■■□□ 2.63
PPARGC1BQ86YN6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PPARGC1BQ86YN6 AL162377.1-201ENST00000618844 1793 ntBASIC31.5■■■□□ 2.63
PPARGC1BQ86YN6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPARGC1BQ86YN6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PPARGC1BQ86YN6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PPARGC1BQ86YN6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
PPARGC1BQ86YN6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.47■■■□□ 2.63
PPARGC1BQ86YN6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.47■■■□□ 2.63
PPARGC1BQ86YN6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PPARGC1BQ86YN6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
PPARGC1BQ86YN6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 AL589743.5-201ENST00000616611 1050 ntBASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC31.46■■■□□ 2.63
PPARGC1BQ86YN6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 AC083880.1-201ENST00000608266 535 ntBASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
PPARGC1BQ86YN6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.45■■■□□ 2.62
PPARGC1BQ86YN6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC31.45■■■□□ 2.62
PPARGC1BQ86YN6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 AC091874.3-201ENST00000512672 1195 ntBASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPARGC1BQ86YN6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 AC142086.2-201ENST00000569753 217 ntBASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 BID-204ENST00000399767 2129 ntTSL 2 BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PPARGC1BQ86YN6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 C2orf69P4-201ENST00000565394 541 ntBASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.42■■■□□ 2.62
PPARGC1BQ86YN6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms