Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRMT12Q53H54 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.68■□□□□ 0.58
TRMT12Q53H54 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRMT12Q53H54 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRMT12Q53H54 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRMT12Q53H54 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRMT12Q53H54 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 HLA-G-202ENST00000376815 851 ntBASIC18.67■□□□□ 0.58
TRMT12Q53H54 HLA-G-203ENST00000376818 1127 ntBASIC18.67■□□□□ 0.58
TRMT12Q53H54 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRMT12Q53H54 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRMT12Q53H54 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT12Q53H54 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT12Q53H54 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 AFG3L1P-217ENST00000557444 2447 ntBASIC18.65■□□□□ 0.58
TRMT12Q53H54 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT12Q53H54 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.65■□□□□ 0.58
TRMT12Q53H54 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.64■□□□□ 0.58
TRMT12Q53H54 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRMT12Q53H54 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.64■□□□□ 0.57
TRMT12Q53H54 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.64■□□□□ 0.57
TRMT12Q53H54 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.64■□□□□ 0.57
TRMT12Q53H54 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.64■□□□□ 0.57
TRMT12Q53H54 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
TRMT12Q53H54 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT12Q53H54 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRMT12Q53H54 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRMT12Q53H54 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT12Q53H54 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT12Q53H54 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRMT12Q53H54 KRT16P6-202ENST00000425692 1426 ntBASIC18.63■□□□□ 0.57
TRMT12Q53H54 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.63■□□□□ 0.57
TRMT12Q53H54 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT12Q53H54 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms