Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PMS1P54277 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22■■□□□ 1.11
PMS1P54277 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PMS1P54277 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PMS1P54277 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22■■□□□ 1.11
PMS1P54277 PWWP2AP1-201ENST00000429776 2273 ntBASIC22■■□□□ 1.11
PMS1P54277 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PMS1P54277 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PMS1P54277 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PMS1P54277 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.99■■□□□ 1.11
PMS1P54277 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PMS1P54277 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PMS1P54277 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PMS1P54277 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.99■■□□□ 1.11
PMS1P54277 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PMS1P54277 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.99■■□□□ 1.11
PMS1P54277 AL031963.3-201ENST00000606441 850 ntBASIC21.99■■□□□ 1.11
PMS1P54277 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.99■■□□□ 1.11
PMS1P54277 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PMS1P54277 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PMS1P54277 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PMS1P54277 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.98■■□□□ 1.11
PMS1P54277 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PMS1P54277 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.98■■□□□ 1.11
PMS1P54277 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.98■■□□□ 1.11
PMS1P54277 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.98■■□□□ 1.11
PMS1P54277 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.98■■□□□ 1.11
PMS1P54277 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.98■■□□□ 1.11
PMS1P54277 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.98■■□□□ 1.11
PMS1P54277 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.98■■□□□ 1.11
PMS1P54277 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 C2orf69P4-201ENST00000565394 541 ntBASIC21.98■■□□□ 1.11
PMS1P54277 AC133552.2-202ENST00000575694 574 ntBASIC21.98■■□□□ 1.11
PMS1P54277 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.98■■□□□ 1.11
PMS1P54277 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.98■■□□□ 1.11
PMS1P54277 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PMS1P54277 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS1P54277 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS1P54277 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS1P54277 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS1P54277 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.97■■□□□ 1.11
PMS1P54277 AL137784.2-201ENST00000607332 1000 ntBASIC21.97■■□□□ 1.11
PMS1P54277 AL589743.5-201ENST00000616611 1050 ntBASIC21.97■■□□□ 1.11
PMS1P54277 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS1P54277 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.97■■□□□ 1.11
PMS1P54277 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS1P54277 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.97■■□□□ 1.11
PMS1P54277 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.96■■□□□ 1.11
PMS1P54277 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.96■■□□□ 1.11
PMS1P54277 CROCCP5-201ENST00000436658 830 ntBASIC21.96■■□□□ 1.11
PMS1P54277 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.96■■□□□ 1.11
PMS1P54277 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PMS1P54277 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.96■■□□□ 1.11
PMS1P54277 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.96■■□□□ 1.11
PMS1P54277 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
PMS1P54277 KRT8P20-201ENST00000423953 1409 ntBASIC21.96■■□□□ 1.11
PMS1P54277 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PMS1P54277 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS1P54277 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PMS1P54277 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PMS1P54277 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.95■■□□□ 1.1
PMS1P54277 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PMS1P54277 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
PMS1P54277 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS1P54277 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms