Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
COL1A2P08123 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.01■■□□□ 1.11
COL1A2P08123 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.01■■□□□ 1.11
COL1A2P08123 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.01■■□□□ 1.11
COL1A2P08123 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.01■■□□□ 1.11
COL1A2P08123 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A2P08123 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A2P08123 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22■■□□□ 1.11
COL1A2P08123 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A2P08123 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22■■□□□ 1.11
COL1A2P08123 SAPCD2P4-201ENST00000424595 1171 ntBASIC22■■□□□ 1.11
COL1A2P08123 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
COL1A2P08123 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL1A2P08123 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A2P08123 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A2P08123 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A2P08123 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
COL1A2P08123 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A2P08123 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
COL1A2P08123 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.99■■□□□ 1.11
COL1A2P08123 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.99■■□□□ 1.11
COL1A2P08123 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.99■■□□□ 1.11
COL1A2P08123 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
COL1A2P08123 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A2P08123 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.99■■□□□ 1.11
COL1A2P08123 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
COL1A2P08123 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.99■■□□□ 1.11
COL1A2P08123 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.99■■□□□ 1.11
COL1A2P08123 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL1A2P08123 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
COL1A2P08123 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL1A2P08123 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A2P08123 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.98■■□□□ 1.11
COL1A2P08123 AC073195.1-201ENST00000607241 877 ntBASIC21.98■■□□□ 1.11
COL1A2P08123 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.98■■□□□ 1.11
COL1A2P08123 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.98■■□□□ 1.11
COL1A2P08123 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.98■■□□□ 1.11
COL1A2P08123 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A2P08123 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A2P08123 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL1A2P08123 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.97■■□□□ 1.11
COL1A2P08123 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A2P08123 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A2P08123 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A2P08123 BX088651.1-201ENST00000540551 451 ntBASIC21.97■■□□□ 1.11
COL1A2P08123 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A2P08123 CD177P1-201ENST00000606252 935 ntBASIC21.97■■□□□ 1.11
COL1A2P08123 TFP1-202ENST00000475455 1573 ntBASIC21.96■■□□□ 1.11
COL1A2P08123 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A2P08123 AP006587.1-201ENST00000534129 1502 ntBASIC21.96■■□□□ 1.11
COL1A2P08123 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
COL1A2P08123 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.96■■□□□ 1.11
COL1A2P08123 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.96■■□□□ 1.11
COL1A2P08123 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL1A2P08123 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms