Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 AL356652.1-201ENST00000615962 565 ntBASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 AL109923.1-201ENST00000618799 583 ntBASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 ID1-201ENST00000376105 1233 ntBASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 LSM12P1-201ENST00000411836 588 ntBASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC105020.6-201ENST00000621523 1217 ntBASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC120498.9-201ENST00000339021 3867 ntBASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV23-1A0A0A0MS06 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 GUSBP6-202ENST00000438529 1198 ntBASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV23-1A0A0A0MS06 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 BX276092.2-201ENST00000417668 665 ntBASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 MIR4758-201ENST00000577688 71 ntBASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC104771.1-201ENST00000603335 964 ntBASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC092118.2-201ENST00000613495 667 ntBASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 KRT8P36-201ENST00000489121 1440 ntBASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV23-1A0A0A0MS06 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV23-1A0A0A0MS06 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV23-1A0A0A0MS06 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 MIPEPP3-201ENST00000412105 444 ntBASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms